Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

$ 3dinfo -orient pb01.rest1_14.r01.despike+orig.
RPI

# ================================= tshift =================================
# time shift data so all slice timing is the same 
foreach run ( $runs )
    3dTshift -tzero 0 -quintic -prefix pb02.$subj.r$run.tshift \
             -tpattern seq+z                                   \
             pb01.$subj.r$run.despike+orig
end

# --------------------------------
# extract volreg registration base
3dbucket -prefix vr_base_min_outlier                           \
    pb02.$subj.r$minoutrun.tshift+orig"[$minouttr]"