AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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October 08, 2017 08:33PM
Hi George,

I wouldn't quite say this is a consequence of censoring,
as the principle culprit is likely band passing. What is
your TR? And how many time points are you staring with?

Well, since you say that subjects start failing at about
70%, I will guess that your TR is 2s, and you have on the
order of 160 time points.

Most people ignore the fact, but for a TR of 2s, the cost
of bandpassing is 60% of the degrees of freedom up front.
If censoring costs another 30% and motion, derivatives,
and polorts cost another 10% (~16 regressors), there goes
100% of the degrees of freedom. And it can get worse...

And to put it another way, if the typical subjects has
only 15% of the time points censored, then they will be
left with about 15% (24?) degrees of freedom for the
correlation analysis. That is not a lot.

For these reasons, I consider band passing the main
culprit.

- rick
Subject Author Posted

3dDeconvolve not enough parameters error

gchahine October 08, 2017 07:59PM

Re: 3dDeconvolve not enough parameters error

rick reynolds October 08, 2017 08:33PM

Re: 3dDeconvolve not enough parameters error

gchahine October 08, 2017 08:53PM

Re: 3dDeconvolve not enough parameters error

gchahine October 10, 2017 07:20AM

Re: 3dDeconvolve not enough parameters error

rick reynolds October 10, 2017 08:32AM

Re: 3dDeconvolve not enough parameters error

gchahine October 11, 2017 08:12AM

Re: 3dDeconvolve not enough parameters error

rick reynolds October 11, 2017 08:46AM

Re: 3dDeconvolve not enough parameters error

gchahine October 11, 2017 08:56AM

Re: 3dDeconvolve not enough parameters error

rick reynolds October 11, 2017 09:16AM

Re: 3dDeconvolve not enough parameters error

RWCox October 09, 2017 08:31AM

Re: 3dDeconvolve not enough parameters error

gchahine October 09, 2017 09:16AM

Re: 3dDeconvolve not enough parameters error

RWCox October 09, 2017 09:36AM