Hi AFNI gurus,
I have to use some mask.nii created by SPM for the beta maps created by AFNI. When I use 3dinfo mask.nii, it shows mask.nii is in ORIG space. I do know that these mask.nii are in MNI space. My thought is, as long as they are in the same common space, I should be fine. Can I just align my stats.nii from afni_proc.py to TT_EPI.nii template?
Thank you as always!
Best,
Z