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chays

November 09, 2017 02:57PM

Registered: 7 years ago
Posts: 10

Thanks so much for your help with this. Here is the output from the commands you gave me:

[chays@induction LEX_logfiles]$ timing_tool.py -multi_timing TG_B7_20170608.lex.*.1D -multi_timing_to_event_list GE:ALL -
# have 6 events in run 1
# class prev_class event_time timediff duration stim_file
1 INIT 15.000 15.000 0.000 TG_B7_20170608.lex.EWO.1D
6 1 60.000 45.000 0.000 TG_B7_20170608.lex.SWOF.1D
2 6 105.000 45.000 0.000 TG_B7_20170608.lex.EWOC.1D
4 2 150.000 45.000 0.000 TG_B7_20170608.lex.SWO.1D
3 4 195.000 45.000 0.000 TG_B7_20170608.lex.EWOF.1D
5 3 240.000 45.000 0.000 TG_B7_20170608.lex.SWOC.1D

# have 6 events in run 2
# class prev_class event_time timediff duration stim_file
6 INIT 15.000 15.000 0.000 TG_B7_20170608.lex.SWOF.1D
4 6 60.000 45.000 0.000 TG_B7_20170608.lex.SWO.1D
1 4 105.000 45.000 0.000 TG_B7_20170608.lex.EWO.1D
5 1 150.000 45.000 0.000 TG_B7_20170608.lex.SWOC.1D
2 5 195.000 45.000 0.000 TG_B7_20170608.lex.EWOC.1D
3 2 240.000 45.000 0.000 TG_B7_20170608.lex.EWOF.1D

# have 6 events in run 3
# class prev_class event_time timediff duration stim_file
2 INIT 15.000 15.000 0.000 TG_B7_20170608.lex.EWOC.1D
1 2 60.000 45.000 0.000 TG_B7_20170608.lex.EWO.1D
3 1 105.000 45.000 0.000 TG_B7_20170608.lex.EWOF.1D
6 3 150.000 45.000 0.000 TG_B7_20170608.lex.SWOF.1D
5 6 195.000 45.000 0.000 TG_B7_20170608.lex.SWOC.1D
4 5 240.000 45.000 0.000 TG_B7_20170608.lex.SWO.1D

# have 6 events in run 4
# class prev_class event_time timediff duration stim_file
4 INIT 15.000 15.000 0.000 TG_B7_20170608.lex.SWO.1D
5 4 60.000 45.000 0.000 TG_B7_20170608.lex.SWOC.1D
6 5 105.000 45.000 0.000 TG_B7_20170608.lex.SWOF.1D
3 6 150.000 45.000 0.000 TG_B7_20170608.lex.EWOF.1D
1 3 195.000 45.000 0.000 TG_B7_20170608.lex.EWO.1D
2 1 240.000 45.000 0.000 TG_B7_20170608.lex.EWOC.1D

# have 6 events in run 5
# class prev_class event_time timediff duration stim_file
3 INIT 15.000 15.000 0.000 TG_B7_20170608.lex.EWOF.1D
2 3 60.000 45.000 0.000 TG_B7_20170608.lex.EWOC.1D
5 2 105.000 45.000 0.000 TG_B7_20170608.lex.SWOC.1D
1 5 150.000 45.000 0.000 TG_B7_20170608.lex.EWO.1D
4 1 195.000 45.000 0.000 TG_B7_20170608.lex.SWO.1D
6 4 240.000 45.000 0.000 TG_B7_20170608.lex.SWOF.1D

# have 6 events in run 6
# class prev_class event_time timediff duration stim_file
5 INIT 15.000 15.000 0.000 TG_B7_20170608.lex.SWOC.1D
3 5 60.000 45.000 0.000 TG_B7_20170608.lex.EWOF.1D
4 3 105.000 45.000 0.000 TG_B7_20170608.lex.SWO.1D
2 4 150.000 45.000 0.000 TG_B7_20170608.lex.EWOC.1D
6 2 195.000 45.000 0.000 TG_B7_20170608.lex.SWOF.1D
1 6 240.000 45.000 0.000 TG_B7_20170608.lex.EWO.1D

[chays@induction LEX_logfiles]$ file_tool -test -infiles TG_B7_20170608.lex.*.1D
TG_B7_20170608.lex.EWO.1D has 0 bad characters

TG_B7_20170608.lex.EWO.1D file type: UNIX
TG_B7_20170608.lex.EWOC.1D has 0 bad characters

TG_B7_20170608.lex.EWOC.1D file type: UNIX
TG_B7_20170608.lex.EWOF.1D has 0 bad characters

TG_B7_20170608.lex.EWOF.1D file type: UNIX
TG_B7_20170608.lex.SWO.1D has 0 bad characters

TG_B7_20170608.lex.SWO.1D file type: UNIX
TG_B7_20170608.lex.SWOC.1D has 0 bad characters

TG_B7_20170608.lex.SWOC.1D file type: UNIX
TG_B7_20170608.lex.SWOF.1D has 0 bad characters

TG_B7_20170608.lex.SWOF.1D file type: UNIX

I also forgot to mention that after running 3ddeconvolve (and getting errors associated with the stimulus timing files) the stimulus times all get replaced with astericks. For example, the stim files will then all read like this after trying to run 3ddeconvolve:

*
*
*
*
*
*

Best,

Chelsea

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Subject	Author	Posted
Stim File Errors with 3ddeconvolve	chays	November 08, 2017 04:25PM
Re: Stim File Errors with 3ddeconvolve	rick reynolds	November 09, 2017 08:54AM
Re: Stim File Errors with 3ddeconvolve	chays	November 09, 2017 02:57PM
Re: Stim File Errors with 3ddeconvolve	rick reynolds	November 09, 2017 03:25PM
Re: Stim File Errors with 3ddeconvolve	chays	November 09, 2017 04:13PM
Re: Stim File Errors with 3ddeconvolve	chays	November 13, 2017 02:13PM
Re: Stim File Errors with 3ddeconvolve	chays	November 13, 2017 03:29PM
Re: Stim File Errors with 3ddeconvolve	rick reynolds	November 13, 2017 05:03PM