AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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October 02, 2020 08:21PM
Hi,

Thank you for making the Allen mouse template available.
I have been warping some of my mice brain images to the CCF3, and the warp is working great (using either auto_warp or @animal_warper). However, the Allen template and the annotation have been taken to the Talairach space. Is there a way to take it out of talairach (to orig space)?

I have tried this function:
3drefit -view
to change the view to orig, but converting its output to NIFTI and then back to BRIK format shows +tlrc space again.

Momo
Subject Author Posted

mice cerebellum template

charujing123 December 06, 2017 01:47AM

Re: mice cerebellum template Attachments

Daniel Glen December 06, 2017 03:28PM

Re: mice cerebellum template

mabbasi6 October 02, 2020 08:21PM

Re: mice cerebellum template

Daniel Glen October 02, 2020 10:24PM