AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 29, 2018 07:04PM
For negative only, the best way is the popup menu and choose "Neg Only". Please note that this menu applies to the threshold value ("Thr" sub-brick). That is, if you have "Neg Only" chosen, then only voxels with threshold values that are negative and below the minus of the slider value will get color.

The color they get is from the "Olay" sub-brick. In some cases, that might be positive. (It will not be if the OLay and Thr volumes are beta coefficient and corresponding t-statistic.)

The "Pos" button turns off displaying colors for negative OLay sub-brick values. That is somewhat different that turning off colors for negative Thr sub-brick values, as the "Pos Only" popup menu item does.
Subject Author Posted

Why are the results of the two methods for "seeing positive value only" different?

Zhang Yu January 26, 2018 04:50PM

Re: Why are the results of the two methods for "seeing positive value only" different?

RWCox January 29, 2018 07:04PM

Re: Why are the results of the two methods for "seeing positive value only" different?

Zhang Yu January 30, 2018 02:19PM

Re: Why are the results of the two methods for "seeing positive value only" different?

Bob Cox January 30, 2018 03:38PM