AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
January 30, 2018 09:17AM
Just switched to a new high performance cluster and forgot to update binaries in my profile...now I have:
/opt/afni/2017_10_2/afni


Thank you very much! this worked. now the output is:

set OutlierCheck =
set OutPrefix = OutBrick
to3d -prefix OutBrick_run_005 -@
++ to3d: AFNI version=AFNI_17.2.16 (Jul 8 2015) [64-bit]
++ Authored by: RW Cox
++ It is best to use to3d via the Dimon program.
++ Counting images: total=192 2D slices
*+ WARNING: If images are wrong, try using '-assume_dicom_mosaic'?
++ Data detected to be oblique
++ Each 2D slice is 256 X 256 pixels
++ Voxel dimensions: 0.9375 X 0.9375 X 0.9000 mm
++ Image data type = short
++ Reading images: ......................................
++ 3D dataset written to disk


Have a great day
Subject Author Posted

Dimon conversion error

daisyburr January 29, 2018 08:20PM

Re: Dimon conversion error

rick reynolds January 29, 2018 10:05PM

Re: Dimon conversion error

daisyburr January 30, 2018 08:46AM

Re: Dimon conversion error

rick reynolds January 30, 2018 09:01AM

Re: Dimon conversion error

daisyburr January 30, 2018 09:17AM

Re: Dimon conversion error

rick reynolds January 30, 2018 09:31AM