AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 21, 2018 05:49PM
> Do you imply that I should use 3dcalc or something like that to compute the average coefficient map
> for each twin pair, for each condition; and then feed these average coefficient maps into 3dMVM?

No, just directly provide input files for each pair to 3dMVM: two rows per condition.

> for each pair, there would be 3 rows in the data table (one for each condition)?

6 rows per pair.

> By averaging the twins, am I not losing degrees of freedom / power?

Not really. You have enough number of twins, so I don't think that DF is an issue.

> That is, this approach would allow me the same degrees of freedom as splitting the sample in half
> (such that no twin pair is in the same group), and then running the same analyses on each cohort, correct?

Right.

> my incentive with looking into a LME approach here was to attempt to maximize power while
> accounting for non-independence in the data.

I'd just go with 3dMVM, which is more straightforward.

Gang
Subject Author Posted

Modeling Twin Data in 3dLME with nesting? [q for Gang]

vumeyer February 19, 2018 04:08PM

Re: Modeling Twin Data in 3dLME with nesting? [q for Gang]

gang February 20, 2018 06:13PM

Re: Modeling Twin Data in 3dLME with nesting? [q for Gang]

gang February 21, 2018 12:20PM

Re: Modeling Twin Data in 3dLME with nesting? [q for Gang]

vumeyer February 21, 2018 12:41PM

Re: Modeling Twin Data in 3dLME with nesting? [q for Gang]

gang February 21, 2018 01:18PM

Re: Modeling Twin Data in 3dLME with nesting? [q for Gang]

vumeyer February 21, 2018 02:19PM

Re: Modeling Twin Data in 3dLME with nesting? [q for Gang]

gang February 21, 2018 05:49PM