AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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ptaylor
April 21, 2018 09:15AM
I agree with Pete.

I would point out that dcm2niix_afni exists within the AFNI distribution-- it is dcm2niix, kindly added for distribution to the AFNI distribution by Chris Rorden. Using that, you wouldn't have to install another package/tool. And AFNI's Dimon might also be useful.

What are your procesing goals for hte data? Dealing with obliquity/possibly obliquity can be a hassle. If at all possible, using the afni_proc.py tool to deal with it while you do other processing steps is probably the most recommended option. But this will depend on what you want to do with the data.

--pt
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Subject Author Posted

AFNI fMRI Preprocessing / 3dWarp

monarch April 20, 2018 09:26AM

Re: AFNI fMRI Preprocessing / 3dWarp

Peter Molfese April 20, 2018 09:51AM

Re: AFNI fMRI Preprocessing / 3dWarp

ptaylor April 21, 2018 09:15AM

Re: AFNI fMRI Preprocessing / 3dWarp

monarch April 23, 2018 02:43PM

Re: AFNI fMRI Preprocessing / 3dWarp

Peter Molfese April 24, 2018 04:22PM