Re: Easy way to extract each roi(value) as a single mask from a multi roi(value) mask

Peter Molfese

June 18, 2018 05:58AM

Registered: 11 years ago
Posts: 628

Hi 2086,

You can do something like this:

3dROIstats -mask MyMask+tlrc.'<1>' MyDataset+tlrc.

Changing the 1 to other numbers can increment through. 3dROIstats will also output a column for each value in the dataset by default, which is my usual method. I then rename the columns (usually in R).

-Peter

Reply Quote

RSS

Subject	Author	Posted
Easy way to extract each roi as a single mask from a multi-roi mask	EXP.2086	June 18, 2018 04:45AM
Re: Easy way to extract each roi(value) as a single mask from a multi roi(value) mask	Peter Molfese	June 18, 2018 05:58AM
Re: Easy way to extract each roi(value) as a single mask from a multi roi(value) mask	EXP.2086	June 18, 2018 11:11AM
Re: Easy way to extract each roi(value) as a single mask from a multi roi(value) mask	ptaylor	June 18, 2018 12:12PM
Re: Easy way to extract each roi(value) as a single mask from a multi roi(value) mask	EXP.2086	June 19, 2018 01:59AM
Re: Easy way to extract each roi(value) as a single mask from a multi roi(value) mask	rosaann	June 19, 2018 09:08AM
Re: Easy way to extract each roi(value) as a single mask from a multi roi(value) mask	Peter Molfese	June 19, 2018 08:58PM