AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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July 04, 2018 03:13PM
Hi everyone,

I've been having a hard time running 3dTrackID. It seems like every time I run it I get the following error:

SEARCHING for vector files with prefix '/Users/dti-afni_DT.nii.gz*':
FINDING: ** FATAL ERROR: Can't open dataset: 'V1' file


My question is... why is the program looking for the vector files in the folder "dti-afni_DT.nii.gz"? I have other file names in that same folder specifically labelled "dti-afni_V1.nii.gz" and "dti-afni_V2.nii.gz"


This is the code I typed up:
3dTrackID -mode PROB -netrois /Users/ROIs.nii.gz -uncert /Users/dti-afni_dwuncert.nii.gz -dti_in /Users/dti-afni_*.nii.gz -dump_rois BOTH -prefix network6_ROI

Is there something I can about about this? It seems to be just a mismatch in the naming of the files.

Any ideas on how to solve this issue?

Thanks for your time. I hope to hear back soon.



Edited 2 time(s). Last edit at 07/04/2018 03:58PM by sondosayyash.
Subject Author Posted

3dTrackID

sondosayyash July 04, 2018 03:13PM

Re: 3dTrackID

ptaylor July 04, 2018 04:29PM

Re: 3dTrackID

sondosayyash July 04, 2018 10:13PM

Re: 3dTrackID

ptaylor July 05, 2018 08:40AM

Re: 3dTrackID

sondosayyash July 05, 2018 12:37PM

Re: 3dTrackID

ptaylor July 05, 2018 01:44PM

Re: 3dTrackID Attachments

sondosayyash July 05, 2018 02:44PM

Re: 3dTrackID

ptaylor July 05, 2018 03:04PM

Re: 3dTrackID Attachments

sondosayyash July 09, 2018 09:55AM

Re: 3dTrackID

ptaylor July 09, 2018 11:45AM

Re: 3dTrackID

sondosayyash August 14, 2018 03:07PM

Re: 3dTrackID

ptaylor August 14, 2018 04:45PM

Re: 3dTrackID

sondosayyash August 14, 2018 04:56PM

Re: 3dTrackID

ptaylor August 14, 2018 05:49PM

Re: 3dTrackID

sondosayyash August 15, 2018 04:55PM