Hi Rick,
Thanks again for your help. Just faced an another issue when running resting state proc py for other participant's data. It showed the message below and stopped running.
*+ WARNING: Input dataset is not 3D+time; assuming TR=1.0
echo -- GCOR = `cat out.gcor.1D`
cat out.gcor.1D
-- GCOR = 0.0541623
3dcalc -a rm.errts.unit+tlrc -b gmean.errts.unit.1D -expr a*b -prefix rm.DP
++ 3dcalc: AFNI version=AFNI_18.2.15 (Aug 28 2018) [64-bit]
++ Authored by: A cast of thousands
3dTstat -sum -prefix corr_brain rm.DP+tlrc
++ 3dTstat: AFNI version=AFNI_18.2.15 (Aug 28 2018) [64-bit]
++ Authored by: KR Hammett & RW Cox
3dcalc -a follow_ROI_aeseg+tlrc -b full_mask.AES131.Ex+tlrc -expr a*b -prefix rm.fm.aeseg
++ 3dcalc: AFNI version=AFNI_18.2.15 (Aug 28 2018) [64-bit]
++ Authored by: A cast of thousands
3dmaskave -q -mask rm.fm.aeseg+tlrc rm.errts.unit+tlrc
++ 3dmaskave: AFNI version=AFNI_18.2.15 (Aug 28 2018) [64-bit]
+++ 6461 voxels survive the mask
3dcalc -a rm.errts.unit+tlrc -b mean.unit.aeseg.1D -expr a*b -prefix rm.DP.aeseg
++ 3dcalc: AFNI version=AFNI_18.2.15 (Aug 28 2018) [64-bit]
++ Authored by: A cast of thousands
3dTstat -sum -prefix corr_af_aeseg rm.DP.aeseg+tlrc
++ 3dTstat: AFNI version=AFNI_18.2.15 (Aug 28 2018) [64-bit]
++ Authored by: KR Hammett & RW Cox
3dcalc -a follow_ROI_FSvent+tlrc -b full_mask.AES131.Ex+tlrc -expr a*b -prefix rm.fm.FSvent
++ 3dcalc: AFNI version=AFNI_18.2.15 (Aug 28 2018) [64-bit]
++ Authored by: A cast of thousands
3dmaskave -q -mask rm.fm.FSvent+tlrc rm.errts.unit+tlrc
++ 3dmaskave: AFNI version=AFNI_18.2.15 (Aug 28 2018) [64-bit]
*** No voxels survive the masking operation
Could you advise why it shows '*** No voxels survive the masking operation' and how to resolve it?
Thanks,
Jun
