AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
September 04, 2018 01:24PM
Thanks again for replying. I'm sorry for the confusion- I only listed three because I have 38 subjects and didn't think it was necessary for the post. I've copied and pasted below the output with the final error message. I'm still missing something, and I cant get past that first GLT 1 error.

***** Summary information of data structure *****
38 subjects : S1001 S1003 S1004 S1005 S1006 S1007 S1008 S1009 S1010 S1011 S1012 S1013 S1014 S1016 S1017 S1018 S1019 S1020 S1021 S1022 S1023 S1024 S1025 S1026 S1027 S1028 S1029 S1030 S1031 S1032 S1033 S1034 S1035 S1036 S1037 S1038 S1039 S1040
304 response values
2 levels for factor oxy : HbO HbR
2 levels for factor acc : right wrong
2 levels for factor noiseType : noise vocod
3 post hoc tests

Contingency tables of subject distributions among the categorical variables:

, , noiseType = noise

acc
oxy right wrong
HbO 38 38
HbR 38 38

, , noiseType = vocod

acc
oxy right wrong
HbO 38 38
HbR 38 38


Tabulation of subjects against each of the categorical variables:
~~~~~~~~~~~~~~
lop$nSubj vs oxy:

HbO HbR
S1001 4 4
S1003 4 4
S1004 4 4
S1005 4 4
S1006 4 4
S1007 4 4
S1008 4 4
S1009 4 4
S1010 4 4
S1011 4 4
S1012 4 4
S1013 4 4
S1014 4 4
S1016 4 4
S1017 4 4
S1018 4 4
S1019 4 4
S1020 4 4
S1021 4 4
S1022 4 4
S1023 4 4
S1024 4 4
S1025 4 4
S1026 4 4
S1027 4 4
S1028 4 4
S1029 4 4
S1030 4 4
S1031 4 4
S1032 4 4
S1033 4 4
S1034 4 4
S1035 4 4
S1036 4 4
S1037 4 4
S1038 4 4
S1039 4 4
S1040 4 4

~~~~~~~~~~~~~~
lop$nSubj vs acc:

right wrong
S1001 4 4
S1003 4 4
S1004 4 4
S1005 4 4
S1006 4 4
S1007 4 4
S1008 4 4
S1009 4 4
S1010 4 4
S1011 4 4
S1012 4 4
S1013 4 4
S1014 4 4
S1016 4 4
S1017 4 4
S1018 4 4
S1019 4 4
S1020 4 4
S1021 4 4
S1022 4 4
S1023 4 4
S1024 4 4
S1025 4 4
S1026 4 4
S1027 4 4
S1028 4 4
S1029 4 4
S1030 4 4
S1031 4 4
S1032 4 4
S1033 4 4
S1034 4 4
S1035 4 4
S1036 4 4
S1037 4 4
S1038 4 4
S1039 4 4
S1040 4 4

~~~~~~~~~~~~~~
lop$nSubj vs noiseType:

noise vocod
S1001 4 4
S1003 4 4
S1004 4 4
S1005 4 4
S1006 4 4
S1007 4 4
S1008 4 4
S1009 4 4
S1010 4 4
S1011 4 4
S1012 4 4
S1013 4 4
S1014 4 4
S1016 4 4
S1017 4 4
S1018 4 4
S1019 4 4
S1020 4 4
S1021 4 4
S1022 4 4
S1023 4 4
S1024 4 4
S1025 4 4
S1026 4 4
S1027 4 4
S1028 4 4
S1029 4 4
S1030 4 4
S1031 4 4
S1032 4 4
S1033 4 4
S1034 4 4
S1035 4 4
S1036 4 4
S1037 4 4
S1038 4 4
S1039 4 4
S1040 4 4

***** End of data structure information *****
++++++++++++++++++++++++++++++++++++++++++++++++++++

Reading input files now...

Reading input files: Done!

If the program hangs here for more than, for example, half an hour,
kill the process because the model specification or the GLT coding
is likely inappropriate.


** Error:
Failed at GLT No. 1! Make sure that the model or GLT specification syntax is correct.
Warning message:
In summary.Anova.mlm(object$Anova, multivariate = FALSE) :
Singular error SSP matrix:
non-sphericity test and corrections not available



Edited 1 time(s). Last edit at 09/04/2018 01:29PM by defenderfer.
Subject Author Posted

Error in if (len%%wd != 0) errex.AFNI(paste("The content under -dataTable is not rectangular !", :

defenderfer August 31, 2018 11:01AM

Re: Error in if (len%%wd != 0) errex.AFNI(paste("The content under -dataTable is not rectangular !", :

gang August 31, 2018 03:00PM

Re: Error in if (len%%wd != 0) errex.AFNI(paste("The content under -dataTable is not rectangular !", :

defenderfer September 03, 2018 08:40AM

Re: Error in if (len%%wd != 0) errex.AFNI(paste("The content under -dataTable is not rectangular !", :

gang September 04, 2018 10:30AM

Re: Error in if (len%%wd != 0) errex.AFNI(paste("The content under -dataTable is not rectangular !", :

defenderfer September 04, 2018 01:24PM