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September 28, 2018 02:04PM
Hi,

I'm receiving the below fatal error on a Mac when attempting to use Dimon to read Siemens .IMA files e.g.
Dimon -infile_prefix <filepath> -assume_dicom_mosaic

- The error occurs when using Precompiled binary macosx_10.7_local: Aug 28 2018 (Version AFNI_18.2.15)
but does not occur when using Precompiled binary linux_openmp_64: Sep 27 2018 (Version AFNI_18.2.19)
- Using Precompiled binary macosx_10.7_local works for some .IMA files for some subjects, but the crash error is more frequent than not

thanks,

Susan

=========

Dimon version 4.23 (May 23, 2018) running, use <ctrl-c> to quit...

-- scanning for first volume

Fatal Signal 6 (SIGABRT) received
mri_dicom_header
mri_read_dicom
Dimon
Bottom of Debug Stack
** AFNI version = AFNI_18.2.15 Compile date = Aug 28 2018
** [[Precompiled binary macosx_10.7_local: Aug 28 2018]]
** Program Death **
** If you report this crash to the AFNI message board,
** please copy the error messages EXACTLY, and give
** the command line you used to run the program, and
** any other information needed to repeat the problem.
** You may later be asked to upload data to help debug.



*********------ CRASH LOG ------------------------------***********
Fatal Signal 6 (SIGABRT) received
.......... recent internal history .........................................
++Dimon [2]: {ENTRY (file=Dimon.c line=447) from Bottom of Debug Stack
+++mri_read_dicom [3]: {ENTRY (file=mri_read_dicom.c line=138) from Dimon
++++mri_dicom_header [4]: {ENTRY (file=mri_dicom_hdr.c line=291) from mri_read_dicom
mri_dicom_header -- <myfilepath>0004.0001.2017.10.11.13.08.29.546875.81989757.IMA
+++++DCM_OpenFile [5]: {ENTRY (file=mri_dicom_hdr.c line=1088) from mri_dicom_header
++++++readFile1 [6]: {ENTRY (file=mri_dicom_hdr.c line=7115) from DCM_OpenFile
+++++++readVRLength [7]: {ENTRY (file=mri_dicom_hdr.c line=6484) from readFile1
-------readVRLength [7]: EXIT} (file=mri_dicom_hdr.c line=6671) to readFile1
readFile1 -- readVRLength fails
------readFile1 [6]: EXIT} (file=mri_dicom_hdr.c line=7352) to DCM_OpenFile
-----DCM_OpenFile [5]: EXIT} (file=mri_dicom_hdr.c line=1162) to mri_dicom_header
............................................................................
mri_dicom_header
mri_read_dicom
Dimon
** AFNI compile date = Aug 28 2018
** [[Precompiled binary macosx_10.7_local: Aug 28 2018]]
** Program Crash **
Subject Author Posted

(Dimon) Program death with mac but not linux binaries

susanw September 28, 2018 02:04PM

Re: (Dimon) Program death with mac but not linux binaries

rick reynolds October 01, 2018 11:08AM