AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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bfuchs
October 30, 2018 03:13PM
Hi,

We are assessing test-retest reliability using ICCb from 3dLME. In seems based on Chen et al. Hum Brain Mapp 2018 that we should be able to get F-statistics for the random effects in addition to the ICC. Is there an option that allows you to specify outputting the F-statistics associated with the ICC values in addition to ICC?

3dLME -prefix $map_folder/${output_name}_fixSession -jobs 1 \
-model "Session" \
-ranEff 'Subj' \
-ICCb \
-mask $map_folder/BothSessions_mask0.8_${today}+tlrc \
-dataTable @${map_folder}/${m}.txt

(Version AFNI_18.2.15)

Thanks,
Bari
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F-stat for ICCb in 3dLME

bfuchs October 30, 2018 03:13PM

Re: F-stat for ICCb in 3dLME

gang October 30, 2018 03:53PM