AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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chaj
November 01, 2018 12:31PM
Hi,

I am trying to make a resting state analysis pipeline. I tried to run afni_proc.py example 11.
Freesurfer is used for parcellation from an anatomical image. I am going to fit this parcellation on the epi functional images as well. In my knowledge, the functional image parcellation is different with the anatomical image parcellation, so that’s why my lab have been using the Craddock template to have whole brain ROIs for the functional images. Is AFNI usually using the freesurfer parcellation(Destrieux atlas) obtained from the anatomical image and fit on the functional images?, or do you have any proper template for the functional images?


Thanks,
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Functional image parcellation

chaj November 01, 2018 12:31PM

Re: Functional image parcellation

Daniel Glen November 02, 2018 03:55PM