AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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December 20, 2018 02:46AM
Thanks for your advise again. This is a detail I never focus before, and I remove the space between '-' and '1'.

However, the same error happened again.

Error: Failed at GLT No. 1! Make sure that the model or GLT specification syntax is correct.

Items as follows

-num_glt 6 \
-gltLabel 1 contrast_Time0 -gltCode 1 'name : 1*self -1*other Time : 1*t0' \
-gltLabel 2 contrast_Time1 -gltCode 2 'name : 1*self -1*other Time : 1*t1' \
-gltLabel 3 contrast_Time2 -gltCode 3 'name : 1*self -1*other Time : 1*t2' \
-gltLabel 4 contrast_Time3 -gltCode 4 'name : 1*self -1*other Time : 1*t3' \
-gltLabel 5 contrast_Time4 -gltCode 5 'name : 1*self -1*other Time : 1*t4' \
-gltLabel 6 contrast_Time5 -gltCode 6 'name : 1*self -1*other Time : 1*t5' \


Furthermore, until now only one script can run successly as follows (there is space between '-' and '1'). , but you advice to use glt. So I am a little confused now.

3dMVM -prefix ./group_result/name_result/task1_output.MVM -jobs 2 \
-bsVars '1' \
-wsVars 'name*Time' \
-num_glf 1 \
-glfLabel 1 contrast_Time -glfCode 1 'name : 1*self - 1*other Time : 1*t0 & 1*t1 & 1*t2 & 1*t3 & 1*t4 & 1*t5' \
-dataTable \
Subj name Time InputFile \
s1 self t0 subj001/beta/subj001_task1_self+tlrc'[0]' \
s1 self t1 subj001/beta/subj001_task1_self+tlrc'[1]' \
s1 self t2 subj001/beta/subj001_task1_self+tlrc'[2]' \
s1 self t3 subj001/beta/subj001_task1_self+tlrc'[3]' \
.....
Subject Author Posted

Error: $ operator is invalid for atomic vectors

jack123 December 18, 2018 08:52AM

Re: Error: $ operator is invalid for atomic vectors

gang December 18, 2018 03:26PM

Re: Error: $ operator is invalid for atomic vectors

jack123 December 19, 2018 02:53AM

Re: Error: $ operator is invalid for atomic vectors

gang December 19, 2018 04:52PM

Re: Error: $ operator is invalid for atomic vectors

jack123 December 20, 2018 02:46AM

Re: Error: $ operator is invalid for atomic vectors

gang December 20, 2018 04:43PM