Hi!
I have a subject with quite a lot of censoring. However, the following afni_proc works well:
afni_proc.py -subj_id sub11 -script proc.sub11 -scr_overwrite -blocks \
despike tshift align tlrc volreg blur mask regress -copy_anat \
/anatomy/sub11.nii -dsets \
/resting_state/sub11_1.nii \
/resting_state/sub11_2.nii \
-tcat_remove_first_trs 0 -align_opts_aea -giant_move -volreg_align_to \
MIN_OUTLIER -volreg_align_e2a -volreg_tlrc_warp -blur_size 4.0 \
-regress_censor_motion 0.25 -regress_bandpass 0.01 0.1 \
-regress_apply_mot_types demean deriv -regress_motion_per_run \
-regress_est_blur_errts -regress_run_clustsim no
Now, I'm trying to understand why it crashes when I try a similar thing, but also regressing out signal from white matter and vent. I get the message of: ** ERROR: total number of fixed regressors (250) is too many for 249 retained time points!
Is there a way to save this subject regressing out wm and ventricles? Here is the afni_proc code that leads to the error:
afni_proc.py -subj_id sub11 -script proc.sub11 -scr_overwrite -blocks despike \
tshift align tlrc volreg blur mask regress -copy_anat \
/SUMA/sub11/T1.nii.gz -dsets \
/resting_state/sub11_1.nii \
/resting_state/sub11_2.nii \
-anat_follower_ROI aaseg anat \
/SUMA/sub11/aparc.a2009s+aseg.nii.gz \
-anat_follower_ROI aeseg epi \
/SUMA/sub11/aparc.a2009s+aseg.nii.gz \
-anat_follower_ROI FSvent epi \
/SUMA/sub11/fs_ap_latvent.nii.gz \
-anat_follower_ROI FSWe epi \
/SUMA/sub11/fs_ap_wm.nii.gz \
-anat_follower_erode FSvent FSWe -tcat_remove_first_trs 0 \
-align_opts_aea -giant_move -volreg_align_to MIN_OUTLIER \
-volreg_align_e2a -volreg_tlrc_warp -blur_size 4.0 \
-regress_censor_motion 0.25 -regress_bandpass 0.01 0.1 \
-regress_apply_mot_types demean deriv -regress_motion_per_run \
-regress_est_blur_errts -regress_run_clustsim no -regress_ROI_PC FSvent \
3 -regress_ROI_PC_per_run FSvent -regress_make_corr_vols aeseg FSvent \
-regress_anaticor_fast -regress_anaticor_label FSWe
I appreciate any input. Thanks!