Hi Justin,
Thanks for your reply.
It doesn't work even with the folder path for .netcc files
naveed@cmfisher:/data/data05/naveed/1.Projects/7.MCSA_rs-fMRI$ @FATCAT_matplot_shiny -ShinyFolder /home/naveed/R/x86_64-pc-linux-gnu-library/3.4/shiny BS0001MC_20180315.results/netcorr_000.netcc
Error: BS0001MC_20180315.results/netcorr_000.netcc does not exist.
This file exists and I already used the .netcc file to generate the connectivity matrix with the following command
fat_mat_sel.py -m netcorr_000.netcc -P "FZ" --A_plotmin=0.27 --B_plotmax=1 --Tight_layout_on --dpi_file=75 -L 2 -d 300 -S 2
Is there any way to get it working without updating the AFNI.
Naveed