AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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jinjingwen
January 24, 2019 10:55AM
Dear AFNI experts,

When I run afni_system_check.py I got the msg:
* missing R packages (see rPkgsInstall)

Then I typed in: sudo rPkgsInstall -pkgs ALL, but I got the following error msg.
Password:

*** caught segfault ***
address 0x0, cause 'memory not mapped'

Traceback:
1: .Call("R_SUMA_HistString", ExecName, args, ohist)
2: AFNI.command.history(ExecName, args, NULL)
3: read.rPkgsInstall.opts.batch(args, verb = 0)
An irrecoverable exception occurred. R is aborting now ...
Segmentation fault
[JinJingwens-Mac-mini:~] FrancesJin%


Can someone help fix this problem?
Thank you very much!

Best,
Frances
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Subject Author Posted

R package installation error

jinjingwen January 24, 2019 10:55AM

Re: R package installation error

Peter Molfese January 24, 2019 02:09PM