AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Liu Mengxing
February 07, 2019 06:26AM
Hi Rick,

Thank you for your recommend.
I tried make_stim_times.py as you suggested, then where was another problem.
As my runs have different TRs, I tried with the option -run_trs which allows me to define TR number for each run, as example 2b did in the command page.

But it gave me an error: missing option -nt

My command is 
make_stim_times.py -files SW1D.mx -prefix stim_times_SW -tr 2 -amplitudes -run_trs 179 169 172 187 181

I'm not sure where went wrong, since the run_trs option was gaven, -nt and -trs were not needed.

Thank you!

Meng
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Subject Author Posted

3dDeconvolve -stim_file uses one zero or HDF

Liu Mengxing February 04, 2019 08:03AM

Re: 3dDeconvolve -stim_file uses one zero or HDF

rick reynolds February 05, 2019 11:14AM

Re: 3dDeconvolve -stim_file uses one zero or HDF

Liu Mengxing February 07, 2019 06:26AM

Re: 3dDeconvolve -stim_file uses one zero or HDF

rick reynolds February 07, 2019 09:40AM

Re: 3dDeconvolve -stim_file uses one zero or HDF

Liu Mengxing February 07, 2019 10:18AM

Re: 3dDeconvolve -stim_file uses one zero or HDF

rick reynolds February 07, 2019 11:02AM