AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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March 01, 2019 03:37PM
Hi Meng,

The grid parent defines the volume space for the output of 3dSurf2Vol, and the number of columns of input data will define the number of volumes to output, which will be of float type. The resulting dataset size should come directly from that.

But still, why are you going back to volume space? If you just want standard space coordinates, do as Peter suggested, and display your results on the standard mesh surface from that space of your choice. Those surface coordinates are already in the given space.

Note that here the transformation between all of the spaces (single subject and template spaces) is done via FreeSurfer's alignment of each to its own template (on the surface).

Anyway, just show your suma results on the MNI152 standard mesh surface.

- rick
Subject Author Posted

report surface-based group analysis results in common space

Liu Mengxing February 28, 2019 07:49AM

Re: report surface-based group analysis results in common space

Peter Molfese February 28, 2019 09:52AM

Re: report surface-based group analysis results in common space

Liu Mengxing February 28, 2019 11:12AM

Re: report surface-based group analysis results in common space

Peter Molfese February 28, 2019 02:04PM

Re: report surface-based group analysis results in common space

Liu Mengxing February 28, 2019 03:16PM

Re: report surface-based group analysis results in common space

Daniel Glen March 01, 2019 02:53PM

Re: report surface-based group analysis results in common space

Liu Mengxing March 01, 2019 03:28PM

Re: report surface-based group analysis results in common space

rick reynolds March 01, 2019 03:37PM

Re: report surface-based group analysis results in common space

Liu Mengxing March 01, 2019 04:00PM

Re: report surface-based group analysis results in common space

rick reynolds March 01, 2019 04:25PM