AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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rick reynolds
March 20, 2019 04:52PM
Hi Chrisine,

You could use the same method that we apply in AFNI_data6/ht03/@stim_analyze_modern.

Note that the script repeatedly calls make_random_timing.py to generate the timing files, then runs cmd.3dd.$iter.txt (which was created by the prior call to MRT.py) to run "3dDeconvolve -nodata" on them. You could just swap these commands out with 3dDeconvolve -nodata run on your own sets of timing files to generate a similar ranking. The script then tells you how to rank them.

How does that seem?

- rick
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Subject Author Posted

evaluating random stimulus timing files for event-related design

Christine Smith March 20, 2019 04:34PM

Re: evaluating random stimulus timing files for event-related design

rick reynolds March 20, 2019 04:52PM