Hey guys:
I used to be able to run Uber-subject.py without issue but today when I went to run it it literally just gives me "Segmentation Fault."
Running it with sudo is slightly more helpful and gives me
`**** failed to import PyQt4.QtGui ****
PyQt4 must be installed to run the uber_subject.py GUI
--> see the output of: uber_subject.py -help_install`
I'm pretty sure PyQT4 is installed on my computer. Running the system check gives me the following output:
`
-------------------------------- general ---------------------------------
architecture: 64bit
system: Darwin
release: 17.3.0
version: Darwin Kernel Version 17.3.0: Thu Nov 9 18:09:22 PST 2017; root:xnu-4570.31.3~1/RELEASE_X86_64
distribution: 10.13.2 x86_64
number of CPUs: 8
apparent login shell: bash (current shell is csh)
shell RC file: .cshrc (exists)
--------------------- AFNI and related program tests ---------------------
which afni : /Users/nixonsghost/abin/afni
afni version : Precompiled binary macos_10.12_local: Mar 20 2019
: AFNI_19.0.26 'Tiberius'
AFNI_version.txt : AFNI_19.0.26, macos_10.12_local, Mar 20 2019
which python : /Users/nixonsghost/anaconda2/bin/python
python version : 2.7.15
which R : /Users/nixonsghost/anaconda2/bin/R
R version : R version 3.5.1 (2018-07-02) -- "Feather Spray"
which tcsh : /bin/tcsh
instances of various programs found in PATH:
afni : 1 (/Users/nixonsghost/abin/afni)
R : 2
/Users/nixonsghost/anaconda2/bin/R
/Library/Frameworks/R.framework/Versions/3.4/Resources/bin/R
python : 3
/Users/nixonsghost/anaconda2/bin/python2.7
/sw/bin/python2.7
/usr/bin/python
python2 : 1 (/Users/nixonsghost/anaconda2/bin/python2.7)
python3 : 1 (/Library/Frameworks/Python.framework/Versions/3.6/bin/python3.6)
testing ability to start various programs...
afni : success
suma : success
3dSkullStrip : success
uber_subject.py : success
3dAllineate : success
3dRSFC : success
SurfMesh : success
3dClustSim : success
checking for R packages...
rPkgsInstall -pkgs ALL -check : FAILURE
oo Warning:
These packages are not installed on the computer: brms!
checking for $HOME files...
.afnirc : found
.sumarc : found
.afni/help/all_progs.COMP : found
------------------------------ python libs -------------------------------
++ module 'PyQt4' found at /sw/lib/qt4-mac/lib/python2.7/site-packages/PyQt4
++ module loaded: PyQt4
Segmentation fault`
I notice I have a load of Pythons in my PATH. Could this be the problem? I'm just confused as to what I changed because it was working a month ago.
Thanks for any insight. usually this is a problem I'd try to solve on my own but I'm horrid at versions and everything else seems to be working so I don't want to mess anything up.
Lauren
Edited 1 time(s). Last edit at 03/26/2019 03:34PM by lhopkins.
