Hi, thank you for the reply- I tried the mricron/dcm2nii (https://www.nitrc.org/projects/mricron) and was able to anonymize the dicom files. I see that the program outputs the anonymized dicom files into the same folder as the identifiable ones. I'll look into how to sort them out and have them saved into another folder.
To answer your question- I am working with dicoms and want to convert them to nifti, because ultimately, my colleague will be working with the nifti files. By anonymizing the dicom files before converting them into niftis, I am assuming this ensures the data is de-identified. Would you recommend this process to get my intended result? Thank you.