Hi AFNI Team,
I am examining three sessions of data from a single subject (not warping to an atlas space). I used align_epi_anat.py to align the epi scans to the T1 from the first session and based on visual inspection it looks like they lined up fairly well. What are some other factors that I might not be taking into consideration?
Also, I discovered a script that seems to make an average T1 for inter-session registration. Is the advantage of this approach that you don’t have to shift the epi scans from certain sessions more than the others?
[
sscc.nimh.nih.gov]
Thanks for your time and advice.
