AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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June 04, 2019 04:10PM
AFNI experts,

I am trying to install R's brms package so I can use the newly introduced afni function RBA. Following the installation step mentioned in RBA documentation, I tried to install the brms package using the following command: rPkgsInstall -pkgs "brms" -site "[cran.us.r-project.org"];.

However, I got several errors (see below). Any help in order to fix this problem will be highly appreciated. Thank you.


Error: package or namespace load failed for ‘igraph’ in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/usr/lib64/R/library/igraph/libs/igraph.so':
libicui18n.so.58: cannot open shared object file: No such file or directory
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/usr/lib64/R/library/igraph’
* installing *source* package ‘sf’ ...
** package ‘sf’ successfully unpacked and MD5 sums checked
configure: CC: gcc -m64 -std=gnu99
configure: CXX: g++ -m64 -std=gnu++11
checking for gdal-config... no
no
configure: error: gdal-config not found or not executable.
ERROR: configuration failed for package ‘sf’
* removing ‘/usr/lib64/R/library/sf’



Edited 1 time(s). Last edit at 06/04/2019 04:12PM by chirag90in.
Subject Author Posted

R package brms installation error

chirag90in June 04, 2019 04:10PM

Re: R package brms installation error

ptaylor June 04, 2019 06:55PM

Re: R package brms installation error

chirag90in June 05, 2019 09:52AM

Re: R package brms installation error

ptaylor June 05, 2019 10:12AM

Re: R package brms installation error

chirag90in June 05, 2019 10:49AM

Re: R package brms installation error

ptaylor June 05, 2019 11:14AM

Re: R package brms installation error

chirag90in June 05, 2019 02:41PM

Re: R package brms installation error

ptaylor June 06, 2019 01:53AM

Re: R package brms installation error

chirag90in June 06, 2019 10:46AM

Re: R package brms installation error

discoraj June 09, 2019 11:04PM