AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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July 17, 2019 06:38PM
Irene,

If 'Corr' is a within-subject quantitative variable, consider

-ranEff '~1+Corr' \

> If I understand correctly the glt4 contrast compares the beta-covariate correlation between groups.

More accurately, GLT #4 looks for the difference of association between beta and 'Corr' between the two group when Category is fixed at 'iaps'.

> When I pulled the betas from the significant cluster and run the correlation analysis in SPSS there
> were no significant correlations for either groups. Could you help me understand why?

I'm not familiar with SPSS. If 'Corr' is a within-subject quantitative variable, how do you handle it in SPSS? You may try to extract one voxel, and try it in SPSS and see if you can duplicate the result from 3dLME.

For your 3dMVM script: change

-num_glt 3 \

to

-num_glt 1 \

Gang
Subject Author Posted

3dLME with covariate issue

irepe July 10, 2019 06:59AM

Re: 3dLME with covariate issue

gang July 10, 2019 09:35PM

Re: 3dLME with covariate issue

irepe July 11, 2019 05:22AM

Re: 3dLME with covariate issue

gang July 11, 2019 11:02AM

Re: 3dLME with covariate issue

irepe July 11, 2019 01:15PM

Re: 3dLME with covariate issue

gang July 12, 2019 06:06AM

Re: 3dLME with covariate issue

irepe July 17, 2019 01:59PM

Re: 3dLME with covariate issue

gang July 17, 2019 06:38PM

Re: 3dLME with covariate issue

irepe July 18, 2019 12:46PM

Re: 3dLME with covariate issue

gang July 18, 2019 09:58PM

Re: 3dLME with covariate issue

irepe July 25, 2019 10:57AM

Re: 3dLME with covariate issue

gang July 25, 2019 10:08PM