AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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July 10, 2019 03:40PM
Hi,

Firstly,I try to compute ALFF,fALFF and the others like mALFF. First for 3dRSFC I used your analysis that published at afni_proc.py examples, 11 I guess. At one message board answer to another user, the experts said that you cant use bandpass and fALFF because fALFF needs full spectrum and he said he is working on a new function which can compute it even after bandpass process. Now my question is that, if I use bandpass and regress_RSFC together as in your afni_proc.py examples will it compute ALFF in the frequency band of bandpass filter cutoff frequencies? Or, if I cancel bandpass process and use the parameters of bandpass for regress_RSFC parameters will it be the same result with bandpass -for the ALFF- ?

Secondly, if I compute ALFF,fALFF, etc -on the analysis which has the lines of both band passed 0.01 0.1 .and regress_RSFC- via 3dAmp and 3dLomb will it produce true results? Or, making analysis without bandpass and regress_RSFC and then computing ALFF,fALFF etc. with 3dAmp and 3dLomb is it the best way -I bet for this-?

Thanks
Abdullah
Subject Author Posted

3dRSFC - 3dAmpToRSFC-3dLombScargle

trabz July 10, 2019 03:40PM

Re: 3dRSFC - 3dAmpToRSFC-3dLombScargle

ptaylor July 10, 2019 07:19PM

Re: 3dRSFC - 3dAmpToRSFC-3dLombScargle

trabz July 11, 2019 05:42AM

Re: 3dRSFC - 3dAmpToRSFC-3dLombScargle

ptaylor July 11, 2019 08:55AM

Re: 3dRSFC - 3dAmpToRSFC-3dLombScargle

trabz July 11, 2019 10:26AM

Re: 3dRSFC - 3dAmpToRSFC-3dLombScargle

ptaylor July 11, 2019 11:19AM