AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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krisknut
August 29, 2019 10:32AM
I'm getting this error message when running afni_proc.py:

#Script is running (command trimmed):
3dcopy /Users/kk/abin/MNI152_T1_2009c+tlrc ./base.nii
++ 3dcopy: AFNI version=AFNI_19.2.20 (Aug 27 2019) [64-bit]
#++ Aligning /Volumes/shares/.../New_analysis/CFS_325/Visit1/CFS_325_Visit1_RS123/1/CFS_325.Visit1.1.results/awpy/base.nii data to /Volumes/shares/.../New_analysis/CFS_325/Visit1/CFS_325_Visit1_RS123/1/CFS_325.Visit1.1.results/awpy/anat.un.nii data
#Script is running (command trimmed):
@auto_tlrc -base ./base.nii -input ./anat.un.nii -suffix .aff -no_ss -no_pre -init_xform CENTER
/bin/sh: @auto_tlrc: command not found
#**ERROR Failed in affine step
** ERROR - script failed
3dbucket: No match.
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Subject Author Posted

/bin/sh: @auto_tlrc: command not found

krisknut August 29, 2019 10:32AM

Re: /bin/sh: @auto_tlrc: command not found

ptaylor August 29, 2019 01:55PM

Re: /bin/sh: @auto_tlrc: command not found

krisknut August 30, 2019 09:41AM

Re: /bin/sh: @auto_tlrc: command not found

ptaylor August 30, 2019 10:03AM

Re: /bin/sh: @auto_tlrc: command not found

krisknut August 30, 2019 11:10AM

Re: /bin/sh: @auto_tlrc: command not found

ptaylor August 30, 2019 11:51AM