AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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November 19, 2019 09:36AM
Dear Peter,

Thanks for your kind reply, just follow what you've suggested, i check the information of the result of following code, while i get a little trouble in finding the DF information, would you mind helping me with that?

3dttest++ -prefix corr_result \
-setA allSubs \
Sub1 CA3-DG_P3_1_z_left+orig \
Sub2 CA3-DG_P3_2_z_left+orig \
Sub3 CA3-DG_P3_3_z_left+orig \
Sub4 CA3-DG_P3_4_z_left+orig \
Sub5 CA3-DG_P3_5_z_left+orig \
Sub6 CA3-DG_P6_1_z_left+orig \
Sub7 CA3-DG_P6_2_z_left+orig \
Sub8 CA3-DG_P6_3_z_left+orig \
-covariates covariates.1D


(env27) [rp@localhost prot]$ 3dinfo corr_result+orig
++ 3dinfo: AFNI version=AFNI_19.3.11 (Nov 1 2019) [64-bit]
Dataset File: corr_result+orig
Identifier Code: XYZ_RHBtc-LqAfMZ2Xekm3pOxA Creation Date: Tue Nov 19 10:32:28 2019
Template Space: ORIG
Dataset Type: Func-Bucket (-fbuc)
Byte Order: LSB_FIRST [this CPU native = LSB_FIRST]
Storage Mode: BRIK
Storage Space: 1,835,008 (1.8 million) bytes
Geometry String: "MATRIX(0.3125,0,0,-10,0,-0.3125,0,10.27441,0,0,0.4,-4.17828):64,64,28"
Data Axes Tilt: Plumb
Data Axes Orientation:
first (x) = Right-to-Left
second (y) = Posterior-to-Anterior
third (z) = Inferior-to-Superior [-orient RPI]
R-to-L extent: -10.000 [R] -to- 9.688 [L] -step- 0.312 mm [ 64 voxels]
A-to-P extent: -9.413 [A] -to- 10.274 [P] -step- 0.312 mm [ 64 voxels]
I-to-S extent: -4.178 -to- 6.622 [S] -step- 0.400 mm [ 28 voxels]
Number of values stored at each pixel = 4
-- At sub-brick #0 'allSubs_mean' datum type is float: -0.135973 to 0.760704
-- At sub-brick #1 'allSubs_Tstat' datum type is float: -10.6224 to 62.319
statcode = fitt; statpar = 6
-- At sub-brick #2 'allSubs_Score' datum type is float: -0.00896952 to 0.0134939
-- At sub-brick #3 'allSubs_Score_Tstat' datum type is float: -5.27929 to 10.0023
statcode = fitt; statpar = 6
Subject Author Posted

Error in using 3dRegAna command

Peng Ren November 17, 2019 05:11AM

Re: Error in using 3dRegAna command

gang November 18, 2019 12:43AM

Re: Error in using 3dRegAna command

Peng Ren November 18, 2019 09:21AM

Re: Error in using 3dRegAna command

Peter Molfese November 18, 2019 12:24PM

Re: Error in using 3dRegAna command

Peng Ren November 18, 2019 10:42PM

Re: Error in using 3dRegAna command

Peter Molfese November 19, 2019 09:04AM

Re: Error in using 3dRegAna command

Peng Ren November 19, 2019 09:36AM

Re: Error in using 3dRegAna command

Peter Molfese November 19, 2019 09:52AM

Re: Error in using 3dRegAna command

Peng Ren November 19, 2019 09:58AM

Re: Error in using 3dRegAna command

Peter Molfese November 19, 2019 10:24AM

Re: Error in using 3dRegAna command

Peng Ren November 19, 2019 10:32AM