AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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gang
May 05, 2020 01:11PM
Thanks for reporting the issue, Andrew!

> Do you think it is safe to fix the sub-bricks using e.g. `3drefit -'type'`?

Yes, it's safe to manually correct the problem.

The bug is on the line #9 from the end of the file 3dLMEr.R:

statsym <- c(statsym, list(list(sb=lop$nF+lop$num_glt+n-1, typ="fict", par=2)))

should be

statsym <- c(statsym, list(list(sb=lop$nF+2*lop$num_glt+n-1, typ="fict", par=2)))

The bug caused the incorrect statistical coding for sub-bricks #40-45 as well as the failure to assign statistical coding for the last 6 sub-bricks #73-78

Gang



Edited 1 time(s). Last edit at 05/05/2020 01:16PM by Gang.
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Subject Author Posted

3dLMEr output sub-bricks with wrong statcode

Andrew Davis May 05, 2020 12:45AM

Re: 3dLMEr output sub-bricks with wrong statcode

gang May 05, 2020 01:11PM

Re: 3dLMEr output sub-bricks with wrong statcode

Andrew Davis May 05, 2020 02:57PM