AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
May 13, 2020 06:23PM
No shortage of problems, trying to run AFNI on this machine:

sh TUIT_3dMVM_MU_DXxEXP_SZvNC.sh

('TUIT_3dMVM_MU_DXxEXP_SZvNC.sh' is below)

afni_system_check.py -check_all
File "/data/brutus_data0/freeware/afni/afni_system_check.py", line 279
print g_help_string
^
SyntaxError: Missing parentheses in call to 'print'. Did you mean print(g_help_string)?

TUIT_3dMVM_MU_DXxEXP_SZvNC.sh
----------
#! bin/sh

# cd /data/brutus_data2/jwaltz/tuit/group.ana/orig_RelUnc
cd /data/brutus_data2/jwaltz/tuit/ana/group.ana/orig_MeanUnc

name='[MeanUncert#1_Coef]'

3dMVM -prefix TUIT_MU_DXxEXP_SZvNC.3dMVM \
-mask ./killmask85_new-resam+tlrc \
-bsVars 'Dx*Exp' \
-jobs 12 \
-dataTable \
Subj Dx Exp InputFile \
12352 HV Explore statsMU.12352+tlrc.${name} \
12405 HV Explore statsMU.12405+tlrc.${name} \
12519 HV Explore statsMU.12519+tlrc.${name} \
12541 HV Explore statsMU.12541+tlrc.${name} \
12546 HV Explore statsMU.12546+tlrc.${name} \
12568 HV Explore statsMU.12568+tlrc.${name} \
12677 HV Explore statsMU.12677+tlrc.${name} \
12678 HV Explore statsMU.12678+tlrc.${name} \
12691 HV Explore statsMU.12691+tlrc.${name} \
12730 HV Explore statsMU.12730+tlrc.${name} \
12734 HV Explore statsMU.12734+tlrc.${name} \
12758 HV Explore statsMU.12758+tlrc.${name} \
12770 HV Explore statsMU.12770+tlrc.${name} \
13067 HV Explore statsMU.13067+tlrc.${name} \
13095 HV Explore statsMU.13095+tlrc.${name} \
13152 HV Explore statsMU.13152+tlrc.${name} \
13210 HV Explore statsMU.13210+tlrc.${name} \
13212 HV Explore statsMU.13212+tlrc.${name} \
13253 HV Explore statsMU.13253+tlrc.${name} \
12594 HV Nonexp statsMU.12594+tlrc.${name} \
12669 HV Nonexp statsMU.12669+tlrc.${name} \
12670 HV Nonexp statsMU.12670+tlrc.${name} \
12671 HV Nonexp statsMU.12671+tlrc.${name} \
12675 HV Nonexp statsMU.12675+tlrc.${name} \
12684 HV Nonexp statsMU.12684+tlrc.${name} \
12693 HV Nonexp statsMU.12693+tlrc.${name} \
12700 HV Nonexp statsMU.12700+tlrc.${name} \
12706 HV Nonexp statsMU.12706+tlrc.${name} \
12733 HV Nonexp statsMU.12733+tlrc.${name} \
12735 HV Nonexp statsMU.12735+tlrc.${name} \
12752 HV Nonexp statsMU.12752+tlrc.${name} \
13018 HV Nonexp statsMU.13018+tlrc.${name} \
13096 HV Nonexp statsMU.13096+tlrc.${name} \
13100 HV Nonexp statsMU.13100+tlrc.${name} \
13199 HV Nonexp statsMU.13199+tlrc.${name} \
12390 SZ Explore statsMU.12390+tlrc.${name} \
12427 SZ Explore statsMU.12427+tlrc.${name} \
12468 SZ Explore statsMU.12468+tlrc.${name} \
12481 SZ Explore statsMU.12481+tlrc.${name} \
12505 SZ Explore statsMU.12505+tlrc.${name} \
12645 SZ Explore statsMU.12645+tlrc.${name} \
12679 SZ Explore statsMU.12679+tlrc.${name} \
12787 SZ Explore statsMU.12787+tlrc.${name} \
12834 SZ Explore statsMU.12834+tlrc.${name} \
12864 SZ Explore statsMU.12864+tlrc.${name} \
12882 SZ Explore statsMU.12882+tlrc.${name} \
12900 SZ Explore statsMU.12900+tlrc.${name} \
12906 SZ Explore statsMU.12906+tlrc.${name} \
12942 SZ Explore statsMU.12942+tlrc.${name} \
12953 SZ Explore statsMU.12953+tlrc.${name} \
13125 SZ Explore statsMU.13125+tlrc.${name} \
13134 SZ Explore statsMU.13134+tlrc.${name} \
12380 SZ Nonexp statsMU.12380+tlrc.${name} \
12425 SZ Nonexp statsMU.12425+tlrc.${name} \
12463 SZ Nonexp statsMU.12463+tlrc.${name} \
12609 SZ Nonexp statsMU.12609+tlrc.${name} \
12614 SZ Nonexp statsMU.12614+tlrc.${name} \
12790 SZ Nonexp statsMU.12790+tlrc.${name} \
12833 SZ Nonexp statsMU.12833+tlrc.${name} \
12863 SZ Nonexp statsMU.12863+tlrc.${name} \
12874 SZ Nonexp statsMU.12874+tlrc.${name} \
13063 SZ Nonexp statsMU.13063+tlrc.${name}
Subject Author Posted

Where does AFNI look for R

James Waltz May 13, 2020 03:07PM

Re: Where does AFNI look for R

ptaylor May 13, 2020 03:43PM

Re: Where does AFNI look for R

James Waltz May 13, 2020 05:48PM

Re: Where does AFNI look for R

ptaylor May 13, 2020 06:12PM

Re: Where does AFNI look for R

James Waltz May 13, 2020 06:23PM

Re: Where does AFNI look for R

ptaylor May 13, 2020 08:02PM

Re: Where does AFNI look for R

James Waltz May 13, 2020 09:47PM

Re: Where does AFNI look for R

James Waltz May 13, 2020 10:00PM

Re: Where does AFNI look for R

ptaylor May 14, 2020 07:44AM

Re: Where does AFNI look for R

James Waltz May 14, 2020 10:26AM

Re: Where does AFNI look for R

James Waltz May 14, 2020 01:11PM

Re: Where does AFNI look for R

rick reynolds May 14, 2020 01:17PM

Re: Where does AFNI look for R

James Waltz May 14, 2020 02:01PM

Re: Where does AFNI look for R

rick reynolds May 14, 2020 03:23PM

Re: Where does AFNI look for R

James Waltz May 15, 2020 01:54PM

Re: Where does AFNI look for R

James Waltz May 19, 2020 09:29PM

Re: Where does AFNI look for R

ptaylor May 20, 2020 09:08AM

Re: Where does AFNI look for R

ptaylor May 14, 2020 12:34PM