AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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July 23, 2020 04:26PM
Actually, we *do* have something that might suit what you want...

Have you tried the "alpha" and "boxed" features in the GUI? This refers to the 'A' and 'B' button at the top of the GUI near the "Thr" button. It's described a bit in this youtube video (give it a minute or two of preamble from this time point... sorry, seemed to make more sense that way...):
[youtu.be]

You can set the threshold value so that above it, results are *opaque* and *boxed*, and those outside of it are increasingly translucent. It is also described here:
[afni.nimh.nih.gov]
... with the drivable form of the AFNI GUI to make images.

We use this a lot to present statistical results. This seems exactly what you want, and the purpose it is there for.

--pt
Subject Author Posted

Color transparency customization in viewer Attachments

rwaugh July 23, 2020 03:20PM

Re: Color transparency customization in viewer

ptaylor July 23, 2020 04:00PM

Re: Color transparency customization in viewer

rwaugh July 23, 2020 04:10PM

Re: Color transparency customization in viewer

ptaylor July 23, 2020 04:26PM

Re: Color transparency customization in viewer

rwaugh July 23, 2020 04:30PM

Re: Color transparency customization in viewer

ptaylor July 23, 2020 05:44PM

Re: Color transparency customization in viewer

Daniel Glen July 23, 2020 05:18PM

Re: Color transparency customization in viewer

rwaugh July 24, 2020 10:50AM