AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Dan
August 23, 2020 12:48AM
Hi Daniel,

I'm sorry to reply so late...

I use "-preserve" to move the data with 3dfractionize:
3dfractionize -template ../ffa_ppa/0815/MNI152_T1_2009c+orig -input FIRST_HOUSEFC_FACEFC_rppa+tlrc -warp TT_N27+tlrc -preserve -clip 0.2 -prefix MNI_FIRST_HOUSEFC_FACEFC_rppa.
The warning was: this option requires short- or byte-valued input dataset！New dataset output failed. (attachment)
I did not successfully transfer the data to the MNI space.

I also tried :
3drefit -space MNI -view tlrc MNI2009c_FIRST_HOUSEFC_FACEFC_rppa+tlrc

I found it just changed some of the information inside the dataset's header, I'm not sure the dataset was in MNI space after 3drefit.

How about “-tta2mni” in 3dWarp? I saw that it can also transform a dataset in tlrc to MNI space.

Could you give me some advice again? I really need the space conversion.

Thanks a lot!



Edited 2 time(s). Last edit at 08/23/2020 01:13AM by Dan.
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Subject Author Posted

Transforming from TT_N27 to MNI space

Dan August 08, 2020 05:34AM

Re: Transforming from TT_N27 to MNI space

Daniel Glen August 09, 2020 09:01AM

Re: Transforming from TT_N27 to MNI space Attachments

Dan August 12, 2020 09:22AM

Re: Transforming from TT_N27 to MNI space

Daniel Glen August 13, 2020 03:03PM

Re: Transforming from TT_N27 to MNI space Attachments

Dan August 18, 2020 10:40AM

Re: Transforming from TT_N27 to MNI space

Daniel Glen August 18, 2020 07:22PM

Re: Transforming from TT_N27 to MNI space Attachments

Dan August 23, 2020 12:48AM

Re: Transforming from TT_N27 to MNI space

Daniel Glen August 24, 2020 03:57PM

Re: Transforming from TT_N27 to MNI space

Dan August 30, 2020 07:37AM