afni.nimh.nih.gov

Hello. I have been trying to run 3dLME script but it is not working. The error says:

"Error in if (len%%wd != 0) errex.AFNI(paste("The content under -dataTable is not rectangular !", : argument is of length zero
Calls: process.LME.opts
Execution halted
./GM_script.sh: line 2: -mask: command not found
./GM_script.sh: line 3: -model: command not found
./GM_script.sh: line 4: -ranEff: command not found
./GM_script.sh: line 5: -SS_type: command not found
./GM_script.sh: line 6: -qVars: command not found
./GM_script.sh: line 7: -num_glt: command not found
and so on until the last line of the script.

It seems to me that there is some kind of problem with the first line but I have no idea what it could be. I will be most grateful for help with this issue. I attach below the full script.

3dLME -prefix GM_VBM_chrono_tod.nii -jobs 4 \
-mask mask.nii \
-model 'chronotype*time*sex+age+TIV' \
-ranEff '~1' \
-SS_type 3 \
-qVars 'age,TIV' \
-num_glt 6 \
-gltLabel 1 'E-M' -gltCode 1 'time : 1*evening -1*morning' \
-gltLabel 2 'EC_E-M' -gltCode 2 'chronotype : 1*EC time: 1*evening -1*morning' \
-gltLabel 3 'LC_E-M' -gltCode 3 'chronotype : 1*LC time: 1*evening -1*morning' \
-gltLabel 4 'M_LC-EC' -gltCode 4 'time : 1*morning chronotype : 1*LC -1*EC' \
-gltLabel 5 'E_LC-EC' -gltCode 5 'time : 1*evening chronotype : 1*LC -1*EC' \
-gltLabel 6 'Avg_LC-EC' -gltCode 6 'time : 1*morning & 1*evening chronotype : 1*LC -1*EC & 1*LC -1*EC' \
-dataTable \
Subj chronotype time sex age TIV InputFile \
sub02 EC morning M 33 1502 /morning/smoothed_mwp1sub-02_T1w_RO.nii \
sub04 EC morning F 26 1429 /morning/smoothed_mwp1sub-04_T1w_RO.nii \
sub07 EC morning M 27 1592 /morning/smoothed_mwp1sub-07_T1w_RO.nii \
sub08 EC morning F 22 1308 /morning/smoothed_mwp1sub-08_T1w_RO.nii \
sub14 EC morning F 26 1456 /morning/smoothed_mwp1sub-14_T1w_RO.nii \
sub15 EC morning F 22 1408 /morning/smoothed_mwp1sub-15_T1w_RO.nii \
sub16 EC morning F 22 1687 /morning/smoothed_mwp1sub-16_T1w_RO.nii \
sub17 EC morning M 23 1719 /morning/smoothed_mwp1sub-17_T1w_RO.nii \
sub18 EC morning M 23 1657 /morning/smoothed_mwp1sub-18_T1w_RO.nii \
sub19 EC morning F 35 1396 /morning/smoothed_mwp1sub-19_T1w_RO.nii \
sub20 LC morning M 20 1655 /morning/smoothed_mwp1sub-20_T1w_RO.nii \
sub21 LC morning M 22 1547 /morning/smoothed_mwp1sub-21_T1w_RO.nii \
sub22 LC morning F 22 1420 /morning/smoothed_mwp1sub-22_T1w_RO.nii \
sub26 LC morning F 24 1430 /morning/smoothed_mwp1sub-26_T1w_RO.nii \
sub29 LC morning F 20 1428 /morning/smoothed_mwp1sub-29_T1w_RO.nii \
sub38 LC morning F 24 1505 /morning/smoothed_mwp1sub-38_T1w_RO.nii \
sub39 LC morning F 33 1313 /morning/smoothed_mwp1sub-39_T1w_RO.nii \
sub40 LC morning M 25 1721 /morning/smoothed_mwp1sub-40_T1w_RO.nii \
sub41 LC morning M 21 1646 /morning/smoothed_mwp1sub-41_T1w_RO.nii \
sub42 LC morning F 22 1355 /morning/smoothed_mwp1sub-42_T1w_RO.nii \
sub43 LC morning M 23 1623 /morning/smoothed_mwp1sub-43_T1w_RO.nii \
sub44 LC morning F 25 1490 /morning/smoothed_mwp1sub-44_T1w_RO.nii \
sub46 LC morning F 25 1503 /morning/smoothed_mwp1sub-46_T1w_RO.nii \
sub47 EC morning F 25 1522 /morning/smoothed_mwp1sub-47_T1w_RO.nii \
sub48 EC morning M 24 1702 /morning/smoothed_mwp1sub-48_T1w_RO.nii \
sub49 EC morning M 21 1359 /morning/smoothed_mwp1sub-49_T1w_RO.nii \
sub50 LC morning F 22 1633 /morning/smoothed_mwp1sub-50_T1w_RO.nii \
sub51 LC morning F 20 1457 /morning/smoothed_mwp1sub-51_T1w_RO.nii \
sub52 LC morning M 25 1683 /morning/smoothed_mwp1sub-52_T1w_RO.nii \
sub53 EC morning F 31 1472 /morning/smoothed_mwp1sub-53_T1w_RO.nii \
sub54 EC morning F 22 1462 /morning/smoothed_mwp1sub-54_T1w_RO.nii \
sub55 LC morning M 22 1877 /morning/smoothed_mwp1sub-55_T1w_RO.nii \
sub56 LC morning F 22 1805 /morning/smoothed_mwp1sub-56_T1w_RO.nii \
sub57 LC morning F 23 1424 /morning/smoothed_mwp1sub-57_T1w_RO.nii \
sub58 LC morning F 24 1480 /morning/smoothed_mwp1sub-58_T1w_RO.nii \
sub59 LC morning M 21 1420 /morning/smoothed_mwp1sub-59_T1w_RO.nii \
sub60 LC morning F 30 1597 /morning/smoothed_mwp1sub-60_T1w_RO.nii \
sub61 LC morning F 22 1420 /morning/smoothed_mwp1sub-61_T1w_RO.nii \
sub62 LC morning M 25 1538 /morning/smoothed_mwp1sub-62_T1w_RO.nii \
sub63 LC morning F 26 1589 /morning/smoothed_mwp1sub-63_T1w_RO.nii \
sub64 LC morning F 24 1462 /morning/smoothed_mwp1sub-64_T1w_RO.nii \
sub65 LC morning M 20 1414 /morning/smoothed_mwp1sub-65_T1w_RO.nii \
sub66 LC morning M 26 1727 /morning/smoothed_mwp1sub-66_T1w_RO.nii \
sub67 LC morning F 22 1503 /morning/smoothed_mwp1sub-67_T1w_RO.nii \
sub68 LC morning F 28 1578 /morning/smoothed_mwp1sub-68_T1w_RO.nii \
sub69 EC morning M 31 1696 /morning/smoothed_mwp1sub-69_T1w_RO.nii \
sub70 EC morning F 21 1653 /morning/smoothed_mwp1sub-70_T1w_RO.nii \
sub72 LC morning F 21 1427 /morning/smoothed_mwp1sub-72_T1w_RO.nii \
sub73 EC morning F 26 1568 /morning/smoothed_mwp1sub-73_T1w_RO.nii \
sub74 EC morning F 23 1362 /morning/smoothed_mwp1sub-74_T1w_RO.nii \
sub75 EC morning F 21 1310 /morning/smoothed_mwp1sub-75_T1w_RO.nii \
sub76 EC morning M 20 1591 /morning/smoothed_mwp1sub-76_T1w_RO.nii \
sub77 EC morning M 24 1571 /morning/smoothed_mwp1sub-77_T1w_RO.nii \
sub78 LC morning F 22 1357 /morning/smoothed_mwp1sub-78_T1w_RO.nii \
sub79 EC morning M 26 1753 /morning/smoothed_mwp1sub-79_T1w_RO.nii \
sub80 EC morning F 22 1707 /morning/smoothed_mwp1sub-80_T1w_RO.nii \
sub81 EC morning F 29 1669 /morning/smoothed_mwp1sub-81_T1w_RO.nii \
sub82 EC morning F 21 1661 /morning/smoothed_mwp1sub-82_T1w_RO.nii \
sub83 EC morning F 31 1419 /morning/smoothed_mwp1sub-83_T1w_RO.nii \
sub84 EC morning F 22 1297 /morning/smoothed_mwp1sub-84_T1w_RO.nii \
sub85 EC morning F 20 1436 /morning/smoothed_mwp1sub-85_T1w_RO.nii \
sub86 EC morning F 22 1558 /morning/smoothed_mwp1sub-86_T1w_RO.nii \
sub87 EC morning M 31 1751 /morning/smoothed_mwp1sub-87_T1w_RO.nii \
sub89 EC morning M 23 1509 /morning/smoothed_mwp1sub-89_T1w_RO.nii \
sub91 LC morning M 25 1588 /morning/smoothed_mwp1sub-91_T1w_RO.nii \
sub92 LC morning M 23 1644 /morning/smoothed_mwp1sub-92_T1w_RO.nii \
sub93 LC morning F 23 1466 /morning/smoothed_mwp1sub-93_T1w_RO.nii \
sub95 LC morning F 24 1314 /morning/smoothed_mwp1sub-95_T1w_RO.nii \
sub99 EC morning M 22 1708 /morning/smoothed_mwp1sub-99_T1w_RO.nii \
sub102 EC morning M 26 1470 /morning/smoothed_mwp1sub-102_T1w_RO.nii \
sub103 EC morning M 24 1693 /morning/smoothed_mwp1sub-103_T1w_RO.nii \
sub104 EC morning F 21 1427 /morning/smoothed_mwp1sub-104_T1w_RO.nii \
sub105 EC morning F 22 1744 /morning/smoothed_mwp1sub-105_T1w_RO.nii \
sub106 LC morning M 31 1756 /morning/smoothed_mwp1sub-106_T1w_RO.nii \
sub02 EC evening M 33 1498 /evening/smoothed_mwp1sub-02_T1w_RO.nii \
sub04 EC evening F 26 1428 /evening/smoothed_mwp1sub-04_T1w_RO.nii \
sub07 EC evening M 27 1590 /evening/smoothed_mwp1sub-07_T1w_RO.nii \
sub08 EC evening F 22 1319 /evening/smoothed_mwp1sub-08_T1w_RO.nii \
sub14 EC evening F 26 1458 /evening/smoothed_mwp1sub-14_T1w_RO.nii \
sub15 EC evening F 22 1405 /evening/smoothed_mwp1sub-15_T1w_RO.nii \
sub16 EC evening F 22 1680 /evening/smoothed_mwp1sub-16_T1w_RO.nii \
sub17 EC evening M 23 1717 /evening/smoothed_mwp1sub-17_T1w_RO.nii \
sub18 EC evening M 23 1650 /evening/smoothed_mwp1sub-18_T1w_RO.nii \
sub19 EC evening F 35 1401 /evening/smoothed_mwp1sub-19_T1w_RO.nii \
sub20 LC evening M 20 1650 /evening/smoothed_mwp1sub-20_T1w_RO.nii \
sub21 LC evening M 22 1554 /evening/smoothed_mwp1sub-21_T1w_RO.nii \
sub22 LC evening F 22 1433 /evening/smoothed_mwp1sub-22_T1w_RO.nii \
sub26 LC evening F 24 1423 /evening/smoothed_mwp1sub-26_T1w_RO.nii \
sub29 LC evening F 20 1422 /evening/smoothed_mwp1sub-29_T1w_RO.nii \
sub38 LC evening F 24 1518 /evening/smoothed_mwp1sub-38_T1w_RO.nii \
sub39 LC evening F 33 1307 /evening/smoothed_mwp1sub-39_T1w_RO.nii \
sub40 LC evening M 25 1722 /evening/smoothed_mwp1sub-40_T1w_RO.nii \
sub41 LC evening M 21 1644 /evening/smoothed_mwp1sub-41_T1w_RO.nii \
sub42 LC evening F 22 1356 /evening/smoothed_mwp1sub-42_T1w_RO.nii \
sub43 LC evening M 23 1637 /evening/smoothed_mwp1sub-43_T1w_RO.nii \
sub44 LC evening F 25 1484 /evening/smoothed_mwp1sub-44_T1w_RO.nii \
sub46 LC evening F 25 1501 /evening/smoothed_mwp1sub-46_T1w_RO.nii \
sub47 EC evening F 25 1502 /evening/smoothed_mwp1sub-47_T1w_RO.nii \
sub48 EC evening M 24 1701 /evening/smoothed_mwp1sub-48_T1w_RO.nii \
sub49 EC evening M 21 1363 /evening/smoothed_mwp1sub-49_T1w_RO.nii \
sub50 LC evening F 22 1650 /evening/smoothed_mwp1sub-50_T1w_RO.nii \
sub51 LC evening F 20 1464 /evening/smoothed_mwp1sub-51_T1w_RO.nii \
sub52 LC evening M 25 1684 /evening/smoothed_mwp1sub-52_T1w_RO.nii \
sub53 EC evening F 31 1481 /evening/smoothed_mwp1sub-53_T1w_RO.nii \
sub54 EC evening F 22 1446 /evening/smoothed_mwp1sub-54_T1w_RO.nii \
sub55 LC evening M 22 1869 /evening/smoothed_mwp1sub-55_T1w_RO.nii \
sub56 LC evening F 22 1810 /evening/smoothed_mwp1sub-56_T1w_RO.nii \
sub57 LC evening F 23 1424 /evening/smoothed_mwp1sub-57_T1w_RO.nii \
sub58 LC evening F 24 1479 /evening/smoothed_mwp1sub-58_T1w_RO.nii \
sub59 LC evening M 21 1415 /evening/smoothed_mwp1sub-59_T1w_RO.nii \
sub60 LC evening F 30 1590 /evening/smoothed_mwp1sub-60_T1w_RO.nii \
sub61 LC evening F 22 1420 /evening/smoothed_mwp1sub-61_T1w_RO.nii \
sub62 LC evening M 25 1520 /evening/smoothed_mwp1sub-62_T1w_RO.nii \
sub63 LC evening F 26 1594 /evening/smoothed_mwp1sub-63_T1w_RO.nii \
sub64 LC evening F 24 1467 /evening/smoothed_mwp1sub-64_T1w_RO.nii \
sub65 LC evening M 20 1417 /evening/smoothed_mwp1sub-65_T1w_RO.nii \
sub66 LC evening M 26 1728 /evening/smoothed_mwp1sub-66_T1w_RO.nii \
sub67 LC evening F 22 1494 /evening/smoothed_mwp1sub-67_T1w_RO.nii \
sub68 LC evening F 28 1593 /evening/smoothed_mwp1sub-68_T1w_RO.nii \
sub69 EC evening M 31 1697 /evening/smoothed_mwp1sub-69_T1w_RO.nii \
sub70 EC evening F 21 1654 /evening/smoothed_mwp1sub-70_T1w_RO.nii \
sub72 LC evening F 21 1433 /evening/smoothed_mwp1sub-72_T1w_RO.nii \
sub73 EC evening F 26 1572 /evening/smoothed_mwp1sub-73_T1w_RO.nii \
sub74 EC evening F 23 1373 /evening/smoothed_mwp1sub-74_T1w_RO.nii \
sub75 EC evening F 21 1307 /evening/smoothed_mwp1sub-75_T1w_RO.nii \
sub76 EC evening M 20 1594 /evening/smoothed_mwp1sub-76_T1w_RO.nii \
sub77 EC evening M 24 1579 /evening/smoothed_mwp1sub-77_T1w_RO.nii \
sub78 LC evening F 22 1350 /evening/smoothed_mwp1sub-78_T1w_RO.nii \
sub79 EC evening M 26 1759 /evening/smoothed_mwp1sub-79_T1w_RO.nii \
sub80 EC evening F 22 1698 /evening/smoothed_mwp1sub-80_T1w_RO.nii \
sub81 EC evening F 29 1664 /evening/smoothed_mwp1sub-81_T1w_RO.nii \
sub82 EC evening F 21 1656 /evening/smoothed_mwp1sub-82_T1w_RO.nii \
sub83 EC evening F 31 1407 /evening/smoothed_mwp1sub-83_T1w_RO.nii \
sub84 EC evening F 22 1297 /evening/smoothed_mwp1sub-84_T1w_RO.nii \
sub85 EC evening F 20 1438 /evening/smoothed_mwp1sub-85_T1w_RO.nii \
sub86 EC evening F 22 1555 /evening/smoothed_mwp1sub-86_T1w_RO.nii \
sub87 EC evening M 31 1746 /evening/smoothed_mwp1sub-87_T1w_RO.nii \
sub89 EC evening M 23 1520 /evening/smoothed_mwp1sub-89_T1w_RO.nii \
sub91 LC evening M 25 1594 /evening/smoothed_mwp1sub-91_T1w_RO.nii \
sub92 LC evening M 23 1638 /evening/smoothed_mwp1sub-92_T1w_RO.nii \
sub93 LC evening F 23 1462 /evening/smoothed_mwp1sub-93_T1w_RO.nii \
sub95 LC evening F 24 1311 /evening/smoothed_mwp1sub-95_T1w_RO.nii \
sub99 EC evening M 22 1716 /evening/smoothed_mwp1sub-99_T1w_RO.nii \
sub102 EC evening M 26 1468 /evening/smoothed_mwp1sub-102_T1w_RO.nii \
sub103 EC evening M 24 1696 /evening/smoothed_mwp1sub-103_T1w_RO.nii \
sub104 EC evening F 21 1434 /evening/smoothed_mwp1sub-104_T1w_RO.nii \
sub105 EC evening F 22 1732 /evening/smoothed_mwp1sub-105_T1w_RO.nii \
sub106 LC evening M 31 1754 /evening/smoothed_mwp1sub-106_T1w_RO.nii