Hi, Tamara-
The PyQt4 dependency had turned in to being a bit of a pain, and indeed we don't really recommend using uber_subject.py to build FMRI processing scripts any more. It's role was to build an afni_proc.py command, and it lagged behind in being able to provide the full flexibility of afni_proc.py. Also, we have a lot of "starter" examples in the afni_proc.py help:
[
afni.nimh.nih.gov]
... that we think are probably more useful starting points, as well as in the Bootcamp dataset (in AFNI_data6/FT_analysis/).
We can also help recommend a starting example or discuss processing command options if you want to describe some of your input data and desired analyses?
--pt
