AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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March 18, 2021 04:23PM
Thank you for your reply.

Yes, those are the models we would like to run. This is our original script for model 1. We added the stressful events (epii) and baseline mental health symptoms (dep_1, anx_1) in as covariates.

RBA -prefix decrease_rba_covid -Subj subj -ROI ROI -Y Y \
-PDP 6 1 -chains 4 -iterations 10000 -model '1+age+sex+epii+dep_1+anx_1+dep_2+anx_2' \
-distROI 'student' -distSubj 'student' -distY 'student' \
-qVars 'age,epii,dep_1,anx_1,dep_2,anx_2' -cvars 'sex' -EOI 'dep_2,anx_2' \
-stdz 'age,epii,dep_1,anx_1,dep_2,anx_2' \
-dataTable decrease_data_table.txt

However for model 2, I am unsure of how to incorporate an interaction term between the baseline fMRI effects at a list of ROIs (Y) and stressful events (epii) to predict the mental health symptoms (dep_2,anx_2). Would the variable under '-Y' in the script be our mental health variable? If so, how does that correspond to having a list of ROI labels for '-ROI,' and would we enter betas for each ROI as a separate predictor (e.g., amygdalaB, insulaB), each with its own interaction term?

Thank you!
Erin
Subject Author Posted

RBA with longitudinal data?

ErinR February 16, 2021 12:27PM

Re: RBA with longitudinal data?

gang February 16, 2021 03:22PM

Re: RBA with longitudinal data?

ErinR February 23, 2021 05:24PM

Re: RBA with longitudinal data?

gang February 24, 2021 05:22PM

Re: RBA with longitudinal data?

ErinR February 26, 2021 11:51AM

Re: RBA with longitudinal data?

gang February 28, 2021 08:13PM

Re: RBA with longitudinal data?

ErinR March 18, 2021 04:23PM

Re: RBA with longitudinal data?

gang March 21, 2021 08:58PM

Re: RBA with longitudinal data? Attachments

ErinR April 01, 2021 12:13PM

Re: RBA with longitudinal data?

gang April 01, 2021 09:00PM