AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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dani2
April 09, 2021 03:54PM
Hi AFNI experts,

This is a trivial (but annoying) problem that I am sure has a very simple solution, and yet I cannot find it . Whenever I switch the underlay (to the anatomical image) in afni viewer, it also changes the overlay; and when I change the overlay (to a functional image), the underlay also changes. Previously, I was able to separately select underlay (as anatomical) and overlay (as functional). Any ideas would be much appreciated. Thanks!

ETA: I realized that the problem is the image I am look at is in +orig, not +tlrc. Now I have a second question. In actuality, this image is in +tlrc space, as it is the results from 3dLMEr analysis. Is there a way to tell AFNI that this file is actually in +tlrc space?

ETA again: Never mind, I solved it, using: 3drefit -space TLRC -view tlrc <filename>. Case closed!



Edited 2 time(s). Last edit at 04/09/2021 04:57PM by dani2.
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Subject Author Posted

afni viewer issue

dani2 April 09, 2021 03:54PM

Re: afni viewer issue

rick reynolds April 09, 2021 04:56PM