AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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May 14, 2021 02:16PM
Hello Paul,

Thank you for the quick reply! Here's what the output of the @djunct_overlap_check tool looks like for the two problematic subjects (top image - weirdly rotated/stretched brain, bottom image - cut-off parietal lobe).

The tool also produces _DEOB images which show a somewhat closer alignment to the MNI template. I don't do deobliquing as part of my pipeline. Is it something that could potentially be helpful?

Best,
Katya
Attachments:
open | download - SUB18_rawanatMNIoverlap.jpg (66.1 KB)
open | download - SUB12_rawanatMNIoverlap.jpg (60.6 KB)
Subject Author Posted

failed normalization to MNI template Attachments

delika May 13, 2021 04:25PM

Re: failed normalization to MNI template

ptaylor May 13, 2021 06:30PM

Re: failed normalization to MNI template Attachments

delika May 14, 2021 02:16PM