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August 05, 2021 05:58AM
Hello AFNI experts, I have a question regarding voxel labels. When I extract the voxel time series (e.g from 2 ROI's) I get the first 3 columns containing xyz coordinates for each voxel series (but they are mixed) and remaining columns are time-series data. My question is there any command that gives me labels along with each coordinate.
> I have AFNI version : AFNI_21.2.01
> I have extracted 2 ROI's using TT_deamon atlas,
> Then combine the 2 ROI's using "3dcalc" command into single mask.
> Then do resample to fMRI data...... then extract the 2 ROI voxel time series using below command.
> 3dmaskdump -noijk -xyz -mask L_R_hippo_fmri_TS_2+tlrc.BRIK pb04.sub_01.r01.scale+tlrc > Hippo_Vox_series.txt



Edited 1 time(s). Last edit at 08/05/2021 06:01AM by Muhammad Shahzaib.
Subject Author Posted

Voxel time series with ROI labels

Muhammad Shahzaib August 05, 2021 05:58AM

Re: Voxel time series with ROI labels

Daniel Glen August 08, 2021 09:51AM