Hi,

thanks for the responses (also via email). Rick, you are right. I thought that censored volumes/TRs will also be censored from the errts file (visually in the AFNI GUI!), so that I would see a "string" of the remaining volumes in the errts file after preprocessing in AFNIs GUI.

One more question came up. Out of my 25 subjects 2 subjects showed heavy head motion.
- Subject 6: Censored 108 of 356 total time points: 30.3%
- Subject 21: Censored 187 of 356 total time points: 52.5%

I think that I should exclude subject 21 from the study, since I already lost 52% DOF after preprocessing. But what about subject 6? Would you recommend to exclude it too based on the loss of 30% of the DOF, or is that percentage of 356 time points still kind of ok? Is there a rule of thumb?

Philipp



Edited 1 time(s). Last edit at 11/10/2021 07:27AM by Philipp.