AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 07, 2022 04:58PM
That's right, Rick. It was all processed within AFNI, using the programs you listed. I did notice what I thought was a mis-specified time field, but I wasn't sure if that was what was causing this issue with converting to NIFTI, or how to fix it. My intuition is that the 3dbucket step when I re-order the sub-briks across subjects to all be in the same order is what created the problem.
In case it's not clear from the history in the header, here's the command I used for that:
3dbucket -fbuc -prefix ${subj}.REML_IMs_reord ${subj}.REML_IMs+orig'[1dcat reorder.1D]'
Subject Author Posted

problem saving HEAD/BRIK to nii

wgraves January 05, 2022 04:54PM

Re: problem saving HEAD/BRIK to nii

rick reynolds January 05, 2022 05:22PM

Re: problem saving HEAD/BRIK to nii

wgraves January 05, 2022 05:41PM

Re: problem saving HEAD/BRIK to nii

rick reynolds January 06, 2022 12:11PM

Re: problem saving HEAD/BRIK to nii

rick reynolds January 06, 2022 05:51PM

Re: problem saving HEAD/BRIK to nii

wgraves January 07, 2022 04:58PM

Re: problem saving HEAD/BRIK to nii

rick reynolds January 07, 2022 09:27PM

Re: problem saving HEAD/BRIK to nii

wgraves January 11, 2022 09:48AM

Re: problem saving HEAD/BRIK to nii

rick reynolds January 11, 2022 12:26PM