Hello,
I am trying to extract the alpha values after I run 3dClusterize for further data analysis, along with everything in the 3dClusterize text report.
After I run afni proc, I can use '*Clusterize' option to set my Clusterize Parameters (NN level, Voxels and Bisided). The results from the Rpt will show a column of Alpha values. This column is what I want to extract as well.
Here is an example of my 3dClusterize code
3dClusterize -nosum -1Dformat -inset $dir/$SubID.results/stats_ROI_$SubID/"$SubID"_allROIs+tlrc.HEAD -idat 0 -ithr 1 -NN 2 -bisided -3.323 3.323 > $results_dir/$SubID.P001/Output.$SubID$Time.RM1.txt
Does 3dClusterize has an option to let me output the alpha values? Or can I use 3dClustSim to get that alpha output?
Thank you for your help
Edited 2 time(s). Last edit at 01/13/2022 12:16PM by khc31.
