AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 30, 2022 12:45PM
Hello,

None of us use conda for installing AFNI, nor do we have a direct connection with the 'hcc' channel for it. If you want to go the conda route, you might have to contact them more directly.

However, I would expect that you could use the linux_openmp_64 that we distribute. It is also much more current than what is provided on by hcc.

If you wish to try this, do a quick, local install into your $HOME/abin directory, and see how it goes:

curl -O https://afni.nimh.nih.gov/pub/dist/bin/misc/@update.afni.binaries
tcsh @update.afni.binaries -package linux_openmp_64

Then evaluate the install by posting the output from:

~/abin/afni_system_check.py -check_all


Note that @update.afni.binaries can set PATH for a few shells when using the -defaults option, but I did not include that so this test would not alter your PATH. You might prefer just a simple test.

If you are happy with this and want it to further initialize your dot files, the most simple thing to do would be to let it run again.

rm ~/abin/afni
tcsh @update.afni.binaries -package linux_openmp_64 -defaults

Does this seem reasonable?

- rick
Subject Author Posted

AFNI installation on Redhat 6 Cluster with Conda

uam111 January 27, 2022 04:09PM

Re: AFNI installation on Redhat 6 Cluster with Conda

rick reynolds January 30, 2022 12:45PM