AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
August 30, 2022 01:10PM
Dear friends,

Following up on the nifti_read_buffer error. I am getting it sporadically when I run multiple processes in parallel. Rerunning the same command (one process) works fine. I wonder if this is an OS limitation.

A sample output is shown below, the ellipses in the path are mine to make the output more readable:

cheers,
Z

++ 3dcopy: AFNI version=AFNI_22.1.14 (Jun 24 2022) [64-bit]
++ WARNING: nifti_read_buffer(/.../ADNIpet/NIFTI/035_S_7021/Baseline.tauPET.I1547562.2.2022-02-17.nii.gz):
data bytes needed = 49222656
data bytes input = -1
number missing = 49222657 (set to 0)
** NIFTI load bricks: cannot read brick 2 from '/.../ADNIpet/NIFTI/035_S_7021/Baseline.tauPET.I1547562.2.2022-02-17.nii.gz'
** FATAL ERROR: Can't load dataset '/.../ADNIpet/NIFTI/035_S_7021/Baseline.tauPET.I1547562.2.2022-02-17.nii.gz': is it complete?
** Program compile date = Jun 24 2022
Subject Author Posted

"data bytes needed" error

Wind March 16, 2022 08:50AM

Re: "data bytes needed" error

rick reynolds March 16, 2022 11:06AM

Re: "data bytes needed" error

Wind March 17, 2022 04:35AM

Re: "data bytes needed" error

Wind March 20, 2022 03:39AM

Re: "data bytes needed" error

rick reynolds March 20, 2022 07:48PM

Re: "data bytes needed" error

Ziad Saad August 30, 2022 01:10PM

Re: "data bytes needed" error

Daniel Glen August 30, 2022 05:12PM

Re: "data bytes needed" error

jbteves August 31, 2022 10:23AM

Re: "data bytes needed" error

Ziad Saad August 31, 2022 03:30PM

Re: "data bytes needed" error

Daniel Glen August 31, 2022 05:05PM

Re: "data bytes needed" error

Ziad Saad September 01, 2022 04:15PM

Re: "data bytes needed" error

Peter Molfese September 01, 2022 04:58PM

Re: "data bytes needed" error

Ziad Saad September 06, 2022 04:07PM

Re: "data bytes needed" error

Daniel Glen September 06, 2022 03:39PM

Re: "data bytes needed" error

Ziad Saad September 06, 2022 04:10PM

Re: "data bytes needed" error

Ziad Saad September 06, 2022 05:34PM

Re: "data bytes needed" error

Daniel Glen September 06, 2022 05:40PM

Re: "data bytes needed" error

Ziad Saad September 06, 2022 06:26PM

Re: "data bytes needed" error

Daniel Glen September 07, 2022 01:55PM