AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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boukes01
March 23, 2022 03:46PM
Hi Rick,

Thank you very much for your quick and effective response! Really helpful.

For the 3dANOVA, I followed your suggestion and tried:
file_tool -test -infile MY_SCRIPT.txt -prefix FIXED.txt

It solved my issue, and I was able to run the 3dANOVA effectively, tons of thanks!

For the 3dMVM, I edited the script as follow:

3dMVM -prefix 3dMVM_PPG -jobs 24 \
-bsVars group \
-wsVars condition \
-num_glf 1 \
-glfLabel 1 'group' -glfCode 1 'group : 1*HC -1*PT & 1*HC -1*PT & 1*PT -1*TC' \
-dataTable \
Subj group condition InputFile \
1371-006_stats HC face-shape 1371-006_stats+tlrc'[20]' \
1371-015_stats HC face-shape 1371-015_stats+tlrc'[20]' \
1371-016_stats HC face-shape 1371-016_stats+tlrc'[20]' \
1371-021_stats HC face-shape 1371-021_stats+tlrc'[20]' \
1371-032-stats HC face-shape 1371-032_stats+tlrc'[20]' \
1371-040_stats HC face-shape 1371-040_stats+tlrc'[20]' \
1371-042_stats HC face-shape 1371-042_stats+tlrc'[20]' \
1371-043_stats HC face-shape 1371-043_stats+tlrc'[20]' \
1371-058_stats HC face-shape 1371-058_stats+tlrc'[20]' \
1371-060_stats HC face-shape 1371-060_stats+tlrc'[20]' \
1371-063_stats HC face-shape 1371-063_stats+tlrc'[20]' \
1371-074_stats HC face-shape 1371-074_stats+tlrc'[20]' \
1371-078_stats HC face-shape 1371-078_stats+tlrc'[20]' \
1371-099_stats HC face-shape 1371-099_stats+tlrc'[20]' \
1372-002_stats HC face-shape 1372-002_stats+tlrc'[20]' \
1372-011_stats HC face-shape 1372-011_stats+tlrc'[20]' \
1372-020_stats HC face-shape 1372-020_stats+tlrc'[20]' \
1372-023_stats HC face-shape 1372-023_stats+tlrc'[20]' \
1372-029_stats HC face-shape 1372-029_stats+tlrc'[20]' \
1372-040_stats HC face-shape 1372-040_stats+tlrc'[20]' \
1372-050_stats HC face-shape 1372-050_stats+tlrc'[20]' \
1371-013_stats PT face-shape 1371-013_stats+tlrc'[20]' \
1371-014_stats PT face-shape 1371-014_stats+tlrc'[20]' \
1371-017_stats PT face-shape 1371-017_stats+tlrc'[20]' \
1371-030_stats PT face-shape 1371-030_stats+tlrc'[20]' \
1371-036_stats PT face-shape 1371-036_stats+tlrc'[20]' \
1371-037_stats PT face-shape 1371-037_stats+tlrc'[20]' \
1371-054_stats PT face-shape 1371-054_stats+tlrc'[20]' \
1371-085_stats PT face-shape 1371-085_stats+tlrc'[20]' \
1371-087_stats PT face-shape 1371-087_stats+tlrc'[20]' \
1371-091_stats PT face-shape 1371-091_stats+tlrc'[20]' \
1371-092_stats PT face-shape 1371-092_stats+tlrc'[20]' \
1371-095_stats PT face-shape 1371-095_stats+tlrc'[20]' \
1371-097_stats PT face-shape 1371-097_stats+tlrc'[20]' \
1371-104_stats PT face-shape 1371-104_stats+tlrc'[20]' \
1372-006_stats PT face-shape 1372-006_stats+tlrc'[20]' \
1372-016_stats PT face-shape 1372-016_stats+tlrc'[20]' \
1372-026_stats PT face-shape 1372-026_stats+tlrc'[20]' \
1372-034_stats PT face-shape 1372-034_stats+tlrc'[20]' \
1372-048_stats PT face-shape 1372-048_stats+tlrc'[20]' \
1371-007_stats TC face-shape 1371-007_stats+tlrc'[20]' \
1371-022_stats TC face-shape 1371-022_stats+tlrc'[20]' \
1371-029_stats TC face-shape 1371-029_stats+tlrc'[20]' \
1371-033_stats TC face-shape 1371-033_stats+tlrc'[20]' \
1371-039_stats TC face-shape 1371-039_stats+tlrc'[20]' \
1371-041_stats TC face-shape 1371-041_stats+tlrc'[20]' \
1371-050_stats TC face-shape 1371-050_stats+tlrc'[20]' \
1371-064_stats TC face-shape 1371-064_stats+tlrc'[20]' \
1371-075_stats TC face-shape 1371-075_stats+tlrc'[20]' \
1371-077_stats TC face-shape 1371-077_stats+tlrc'[20]' \
1371-080_stats TC face-shape 1371-080_stats+tlrc'[20]' \
1371-084_stats TC face-shape 1371-084_stats+tlrc'[20]' \
1371-093_stats TC face-shape 1371-093_stats+tlrc'[20]' \
1371-094_stats TC face-shape 1371-094_stats+tlrc'[20]' \
1371-101_stats TC face-shape 1371-101_stats+tlrc'[20]' \
1372-001_stats TC face-shape 1372-001_stats+tlrc'[20]' \
1372-004_stats TC face-shape 1372-004_stats+tlrc'[20]' \
1372-007_stats TC face-shape 1372-007_stats+tlrc'[20]' \
1372-008_stats TC face-shape 1372-008_stats+tlrc'[20]' \
1372-009_stats TC face-shape 1372-009_stats+tlrc'[20]' \
1372-010_stats TC face-shape 1372-010_stats+tlrc'[20]' \
1372-012_stats TC face-shape 1372-012_stats+tlrc'[20]' \
1372-013_stats TC face-shape 1372-013_stats+tlrc'[20]' \
1372-017_stats TC face-shape 1372-017_stats+tlrc'[20]' \
1372-018_stats TC face-shape 1372-018_stats+tlrc'[20]' \
1372-022_stats TC face-shape 1372-022_stats+tlrc'[20]' \
1372-027_stats TC face-shape 1372-027_stats+tlrc'[20]' \
1372-032_stats TC face-shape 1372-032_stats+tlrc'[20]' \
1372-035_stats TC face-shape 1372-035_stats+tlrc'[20]' \
1372-042_stats TC face-shape 1372-042_stats+tlrc'[20]' \
1372-045_stats TC face-shape 1372-045_stats+tlrc'[20]' \
1372-047_stats TC face-shape 1372-047_stats+tlrc'[20]' \
1372-049_stats TC face-shape 1372-049_stats+tlrc'[20]'


I ran the script again, but it didn't work. I tried:
file_tool -test -infile MY_SCRIPT.txt -prefix FIXED2.txt

and re-run 3dMVM and now had the following message:

Error: quitting due to model test failure.

I know that I can use the 3dANOVA that is now working, but out of curiosity, would you know what's wrong in my 3dMVM model?

Thanks again,

Sarah.
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Subject Author Posted

one-way between subjects ANOVA using 3dANOVA and 3dMVM Attachments

boukes01 March 23, 2022 10:40AM

Re: one-way between subjects ANOVA using 3dANOVA and 3dMVM

rick reynolds March 23, 2022 10:58AM

Re: one-way between subjects ANOVA using 3dANOVA and 3dMVM

boukes01 March 23, 2022 03:46PM

Re: one-way between subjects ANOVA using 3dANOVA and 3dMVM

rick reynolds March 23, 2022 05:28PM

Re: one-way between subjects ANOVA using 3dANOVA and 3dMVM

gang March 23, 2022 08:31PM

Re: one-way between subjects ANOVA using 3dANOVA and 3dMVM

boukes01 March 24, 2022 06:08PM