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---- combine methods that use Prantik's "original" tedana.py ----
Prantik's tedana.py is run using the 'tedana*' combine methods.
Prantik's tedana.py requires python 2.7.
By default, tedana.py will be applied from the AFNI
installation directory.
Alternatively, one can specify the location of a different
tedana.py using -combine_tedana_path. And if it is
preferable to run it as an executable (as opposed to running
it via 'python PATH/TO/tedana.py'), one can tell this to
tedana_wrapper.py by applying:
-combine_opts_tedwrap -tedana_is_exec
methods
-------
OC_tedort : OC, and pass tedana orts to regression
tedana : run tedana.py, using output dn_ts_OC.nii
tedana_OC : run tedana.py, using output ts_OC.nii
(i.e. use tedana.py for optimally combined)
tedana_OC_tedort : tedana_OC, and include tedana orts
---- combine methods that use tedana from the MEICA group ----
The MEICA group tedana is specified with 'm_tedana*' methods.
This tedana requires python 3.6+.
AFNI does not distribute this version of tedana, so it must
be in the PATH. For installation details, please see:
[
tedana.readthedocs.io]
methods
-------
m_tedana : tedana from MEICA group (dn_ts_OC.nii.gz)
m_tedana_OC : tedana OC from MEICA group (ts_OC.nii.gz)
m_tedana_m_tedort: tedana from MEICA group (dn_ts_OC.nii.gz)
"tedort" from MEICA group
(--tedort: "good" projected from "bad")