AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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RJ
July 21, 2022 12:38AM
How can I invoke the -ClustSim option in 3dttest++?

For example my script is the following:
3dttest++ -ClustSim -AminusB -prefix /Volumes/groupanalyses/SN_ASDvsSSD.nii.gz \
-setA \
[setA list]
-setB \
[setB list]

But I am getting the following error:
++ 3dttest++: AFNI version=AFNI_21.3.17 (Dec 30 2021) [64-bit]
++ Authored by: Zhark++
++ Number of -Clustsim threads set to 8
++ option -setA :: processing as SHORT form (all values are datasets)
++ have 24 volumes corresponding to option '-setA'
++ option -setB :: processing as SHORT form (all values are datasets)
++ have 26 volumes corresponding to option '-setB'
** FATAL ERROR: Cannot use -Clustsim when -prefix has an absolute path
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Subject Author Posted

clustsim on 3dttest++

RJ July 21, 2022 12:38AM

Re: clustsim on 3dttest++

ptaylor July 21, 2022 09:02AM