AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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October 28, 2022 01:09PM
I was wondering if there are any tricks for getting @animal_warper to work better with T2w images? I tried setting the cost to lpc+ZZ and that improved things but it's still not great. The white matter aligns reasonably well in some spots but the gray matter is pretty off (brain size overestimated). Maybe the scans I received to process are simply too bad for this to work, but I feel it has worked better in the past for worse-looking T1w scans. Any leads?
Subject Author Posted

@animal_warper with T2w

ChrisKlink October 28, 2022 01:09PM

Re: @animal_warper with T2w

Daniel Glen October 28, 2022 03:13PM